Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Gm12165-201ENSMUST00000117047 342 ntBASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Gm13045-201ENSMUST00000119019 712 ntBASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Gm10774-201ENSMUST00000188689 204 ntBASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Ginm1-202ENSMUST00000065124 300 ntBASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdha3Q91Y16 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Gm11783-201ENSMUST00000119549 885 ntBASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Gm19353-201ENSMUST00000184561 445 ntBASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Gm37986-201ENSMUST00000193285 383 ntBASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Gm5982-201ENSMUST00000196234 512 ntBASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Gm7940-201ENSMUST00000218195 769 ntBASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pcdha3Q91Y16 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdha3Q91Y16 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms