Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Gm9132-201ENSMUST00000210182 832 ntBASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Gm2553-201ENSMUST00000215986 605 ntBASIC13.28□□□□□ -0.28
Ddx41Q91VN6 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.28□□□□□ -0.28
Ddx41Q91VN6 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.28□□□□□ -0.28
Ddx41Q91VN6 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx41Q91VN6 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx41Q91VN6 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx41Q91VN6 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx41Q91VN6 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx41Q91VN6 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx41Q91VN6 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx41Q91VN6 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx41Q91VN6 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx41Q91VN6 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Gm14193-201ENSMUST00000105067 153 ntBASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Gm13916-201ENSMUST00000117368 628 ntBASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Gm8731-201ENSMUST00000118088 412 ntBASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Gm13888-201ENSMUST00000119148 422 ntBASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Gm14585-201ENSMUST00000120713 634 ntBASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Gm27438-201ENSMUST00000183480 110 ntBASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Gm38117-201ENSMUST00000194653 939 ntBASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.27□□□□□ -0.29
Ddx41Q91VN6 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.27□□□□□ -0.29
Ddx41Q91VN6 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Gm38140-201ENSMUST00000193617 2755 ntBASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Gm42141-201ENSMUST00000196534 2172 ntBASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx41Q91VN6 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Gm37613-201ENSMUST00000195677 3580 ntBASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Gm15352-201ENSMUST00000118696 270 ntBASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Gm9540-201ENSMUST00000188230 478 ntBASIC13.26□□□□□ -0.29
Ddx41Q91VN6 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Gm45550-201ENSMUST00000209380 946 ntBASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx41Q91VN6 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms