Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp33Q8R5K2 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC13.32□□□□□ -0.28
Usp33Q8R5K2 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Usp33Q8R5K2 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp33Q8R5K2 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Usp33Q8R5K2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp33Q8R5K2 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.32□□□□□ -0.28
Usp33Q8R5K2 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Usp33Q8R5K2 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp33Q8R5K2 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp33Q8R5K2 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp33Q8R5K2 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp33Q8R5K2 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Gm12194-201ENSMUST00000117756 1012 ntBASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Gm15003-201ENSMUST00000118884 446 ntBASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Gm12943-201ENSMUST00000119616 210 ntBASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Gm14441-201ENSMUST00000121960 540 ntBASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Gm8451-201ENSMUST00000170338 447 ntBASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Gm6423-201ENSMUST00000204315 934 ntBASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Gm3433-201ENSMUST00000210149 1058 ntBASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Gm6390-201ENSMUST00000215034 589 ntBASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.31□□□□□ -0.28
Usp33Q8R5K2 AC164437.3-201ENSMUST00000228323 347 ntBASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Gm7536-201ENSMUST00000077389 444 ntBASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Gm5453-201ENSMUST00000080866 447 ntBASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp33Q8R5K2 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.3□□□□□ -0.28
Usp33Q8R5K2 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp33Q8R5K2 AC107453.4-201ENSMUST00000227068 1817 ntBASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Gm12179-201ENSMUST00000118344 1272 ntBASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Gm11979-201ENSMUST00000119629 743 ntBASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Gm14213-201ENSMUST00000119778 768 ntBASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Gm15329-201ENSMUST00000121408 155 ntBASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Gm15549-201ENSMUST00000121595 622 ntBASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC13.3□□□□□ -0.28
Usp33Q8R5K2 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms