Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Gm19178-201ENSMUST00000217524 1819 ntBASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Adgrv1-214ENSMUST00000224088 1492 ntBASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Gm12463-201ENSMUST00000118271 849 ntBASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Gm16505-201ENSMUST00000179981 232 ntBASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Gm2965-201ENSMUST00000198365 343 ntBASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 AC160929.1-201ENSMUST00000221247 415 ntBASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cchcr1Q8K2I2 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Gm36940-201ENSMUST00000194281 2036 ntBASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Gm38151-201ENSMUST00000195085 289 ntBASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 AC125374.1-201ENSMUST00000213573 1400 ntBASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Btrc-209ENSMUST00000224478 2194 ntBASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Gm35850-202ENSMUST00000211705 2120 ntBASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cchcr1Q8K2I2 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cchcr1Q8K2I2 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC13.59□□□□□ -0.23
Cchcr1Q8K2I2 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cchcr1Q8K2I2 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms