Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clip4Q8CI96 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Clip4Q8CI96 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clip4Q8CI96 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.63□□□□□ -0.55
Clip4Q8CI96 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Clip4Q8CI96 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Clip4Q8CI96 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.62□□□□□ -0.55
Clip4Q8CI96 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.62□□□□□ -0.55
Clip4Q8CI96 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Gm23596-201ENSMUST00000104304 132 ntBASIC11.62□□□□□ -0.55
Clip4Q8CI96 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Gm15610-201ENSMUST00000120584 195 ntBASIC11.62□□□□□ -0.55
Clip4Q8CI96 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.62□□□□□ -0.55
Clip4Q8CI96 Gm12566-201ENSMUST00000121479 359 ntBASIC11.62□□□□□ -0.55
Clip4Q8CI96 B9d1os-201ENSMUST00000137010 674 ntBASIC11.62□□□□□ -0.55
Clip4Q8CI96 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Gm18734-201ENSMUST00000172937 808 ntBASIC11.62□□□□□ -0.55
Clip4Q8CI96 Gm5706-201ENSMUST00000181525 993 ntBASIC11.62□□□□□ -0.55
Clip4Q8CI96 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.62□□□□□ -0.55
Clip4Q8CI96 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.62□□□□□ -0.55
Clip4Q8CI96 Gm43138-201ENSMUST00000199123 708 ntBASIC11.62□□□□□ -0.55
Clip4Q8CI96 Gm18753-201ENSMUST00000201000 566 ntBASIC11.62□□□□□ -0.55
Clip4Q8CI96 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.62□□□□□ -0.55
Clip4Q8CI96 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Clip4Q8CI96 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.61□□□□□ -0.55
Clip4Q8CI96 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.61□□□□□ -0.55
Clip4Q8CI96 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.61□□□□□ -0.55
Clip4Q8CI96 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.61□□□□□ -0.55
Clip4Q8CI96 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Gm3332-201ENSMUST00000189337 928 ntBASIC11.61□□□□□ -0.55
Clip4Q8CI96 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.61□□□□□ -0.55
Clip4Q8CI96 Gm7848-201ENSMUST00000210739 718 ntBASIC11.61□□□□□ -0.55
Clip4Q8CI96 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Gm807-202ENSMUST00000224929 408 ntBASIC11.61□□□□□ -0.55
Clip4Q8CI96 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.61□□□□□ -0.55
Clip4Q8CI96 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.61□□□□□ -0.55
Clip4Q8CI96 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clip4Q8CI96 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms