Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Gm17825-201ENSMUST00000206836 794 ntBASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Gm5996-201ENSMUST00000211110 718 ntBASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Gm18642-201ENSMUST00000206642 1400 ntBASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Brf1Q8CFK2 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf1Q8CFK2 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Gm37969-201ENSMUST00000195777 3409 ntBASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Mir5132-201ENSMUST00000175166 71 ntBASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Gm8574-201ENSMUST00000203207 924 ntBASIC13.87□□□□□ -0.19
Brf1Q8CFK2 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.87□□□□□ -0.19
Brf1Q8CFK2 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Rgr-203ENSMUST00000225070 4704 ntBASIC13.87□□□□□ -0.19
Brf1Q8CFK2 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Gm5740-201ENSMUST00000211003 1857 ntBASIC13.87□□□□□ -0.19
Brf1Q8CFK2 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 AC166836.1-201ENSMUST00000219933 1795 ntBASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Gm15352-201ENSMUST00000118696 270 ntBASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Gm11331-201ENSMUST00000119764 288 ntBASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Gm11836-201ENSMUST00000121022 441 ntBASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Gm15432-201ENSMUST00000121106 195 ntBASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.86□□□□□ -0.19
Brf1Q8CFK2 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Gm8342-201ENSMUST00000209839 757 ntBASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Gm2517-201ENSMUST00000215651 348 ntBASIC13.86□□□□□ -0.19
Brf1Q8CFK2 AC122408.1-201ENSMUST00000218949 218 ntBASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Brf1Q8CFK2 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms