Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Gm11989-201ENSMUST00000117240 672 ntBASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Gm11362-201ENSMUST00000118838 850 ntBASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Gm12997-201ENSMUST00000120207 640 ntBASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc87Q8CDL9 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Gm26461-201ENSMUST00000175064 290 ntBASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Gm2260-201ENSMUST00000184965 657 ntBASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Gm45186-201ENSMUST00000206874 478 ntBASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc87Q8CDL9 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc87Q8CDL9 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms