Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.45□□□□□ -0.26
Vps53Q8CCB4 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Gm6114-201ENSMUST00000182472 968 ntBASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Gm19287-201ENSMUST00000203190 358 ntBASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Vps53Q8CCB4 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps53Q8CCB4 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
Vps53Q8CCB4 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms