Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ska3Q8C263 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ska3Q8C263 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.87□□□□□ -0.67
Ska3Q8C263 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ska3Q8C263 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.87□□□□□ -0.67
Ska3Q8C263 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ska3Q8C263 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ska3Q8C263 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ska3Q8C263 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Ska3Q8C263 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ska3Q8C263 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.86□□□□□ -0.67
Ska3Q8C263 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.86□□□□□ -0.67
Ska3Q8C263 Gm15595-201ENSMUST00000120840 961 ntBASIC10.86□□□□□ -0.67
Ska3Q8C263 Gm15566-201ENSMUST00000121130 590 ntBASIC10.86□□□□□ -0.67
Ska3Q8C263 Gm12566-201ENSMUST00000121479 359 ntBASIC10.86□□□□□ -0.67
Ska3Q8C263 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.86□□□□□ -0.67
Ska3Q8C263 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.86□□□□□ -0.67
Ska3Q8C263 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.86□□□□□ -0.67
Ska3Q8C263 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Ska3Q8C263 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Ska3Q8C263 Gm9540-201ENSMUST00000188230 478 ntBASIC10.86□□□□□ -0.67
Ska3Q8C263 Gm37246-201ENSMUST00000192665 835 ntBASIC10.86□□□□□ -0.67
Ska3Q8C263 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Spcs1-203ENSMUST00000226374 592 ntBASIC10.86□□□□□ -0.67
Ska3Q8C263 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Ska3Q8C263 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.86□□□□□ -0.67
Ska3Q8C263 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Ska3Q8C263 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.86□□□□□ -0.67
Ska3Q8C263 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ska3Q8C263 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.86□□□□□ -0.67
Ska3Q8C263 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Ska3Q8C263 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.86□□□□□ -0.67
Ska3Q8C263 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ska3Q8C263 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.85□□□□□ -0.67
Ska3Q8C263 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Gm9062-201ENSMUST00000117712 727 ntBASIC10.85□□□□□ -0.67
Ska3Q8C263 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.85□□□□□ -0.67
Ska3Q8C263 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.85□□□□□ -0.67
Ska3Q8C263 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.85□□□□□ -0.67
Ska3Q8C263 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.85□□□□□ -0.67
Ska3Q8C263 Gm26461-201ENSMUST00000175064 290 ntBASIC10.85□□□□□ -0.67
Ska3Q8C263 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.85□□□□□ -0.67
Ska3Q8C263 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC10.85□□□□□ -0.67
Ska3Q8C263 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC10.85□□□□□ -0.67
Ska3Q8C263 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.85□□□□□ -0.67
Ska3Q8C263 Gm43378-201ENSMUST00000199336 582 ntBASIC10.85□□□□□ -0.67
Ska3Q8C263 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.85□□□□□ -0.67
Ska3Q8C263 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10.85□□□□□ -0.67
Ska3Q8C263 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Ska3Q8C263 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.85□□□□□ -0.67
Ska3Q8C263 Abhd11os-203ENSMUST00000222613 363 ntBASIC10.85□□□□□ -0.67
Ska3Q8C263 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Ginm1-202ENSMUST00000065124 300 ntBASIC10.85□□□□□ -0.67
Ska3Q8C263 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Ska3Q8C263 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.85□□□□□ -0.67
Ska3Q8C263 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ska3Q8C263 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms