Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim35Q8C006 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim35Q8C006 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim35Q8C006 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.18□□□□□ -0.3
Trim35Q8C006 Ubd-201ENSMUST00000038844 931 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim35Q8C006 Gm26064-201ENSMUST00000083381 109 ntBASIC13.18□□□□□ -0.3
Trim35Q8C006 Gm26107-201ENSMUST00000083972 107 ntBASIC13.18□□□□□ -0.3
Trim35Q8C006 Mrgprb4-201ENSMUST00000094388 1219 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim35Q8C006 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim35Q8C006 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim35Q8C006 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim35Q8C006 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim35Q8C006 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim35Q8C006 Ndufa9-203ENSMUST00000205002 1445 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim35Q8C006 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim35Q8C006 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim35Q8C006 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.18□□□□□ -0.3
Trim35Q8C006 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim35Q8C006 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trim35Q8C006 Gm4491-201ENSMUST00000159455 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim35Q8C006 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim35Q8C006 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim35Q8C006 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim35Q8C006 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim35Q8C006 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim35Q8C006 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim35Q8C006 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim35Q8C006 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim35Q8C006 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Trim35Q8C006 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.17□□□□□ -0.3
Trim35Q8C006 Gm16421-201ENSMUST00000117616 1557 ntBASIC13.17□□□□□ -0.3
Trim35Q8C006 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Gm438-201ENSMUST00000105746 1432 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Trim35Q8C006 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Gm11689-201ENSMUST00000120766 302 ntBASIC13.17□□□□□ -0.3
Trim35Q8C006 Mir1894-201ENSMUST00000122802 81 ntBASIC13.17□□□□□ -0.3
Trim35Q8C006 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim35Q8C006 Gm44397-201ENSMUST00000195950 113 ntBASIC13.17□□□□□ -0.3
Trim35Q8C006 Gm44385-201ENSMUST00000198781 81 ntBASIC13.17□□□□□ -0.3
Trim35Q8C006 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC13.17□□□□□ -0.3
Trim35Q8C006 AC105169.1-201ENSMUST00000218912 1294 ntBASIC13.17□□□□□ -0.3
Trim35Q8C006 Gm17330-201ENSMUST00000221047 165 ntBASIC13.17□□□□□ -0.3
Trim35Q8C006 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.17□□□□□ -0.3
Trim35Q8C006 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trim35Q8C006 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Trim35Q8C006 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim35Q8C006 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Gm37886-201ENSMUST00000195349 1513 ntBASIC13.17□□□□□ -0.3
Trim35Q8C006 AC147639.2-202ENSMUST00000224834 1545 ntBASIC13.17□□□□□ -0.3
Trim35Q8C006 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.17□□□□□ -0.3
Trim35Q8C006 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Gm10754-202ENSMUST00000220233 1633 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trim35Q8C006 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim35Q8C006 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Trim35Q8C006 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim35Q8C006 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim35Q8C006 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim35Q8C006 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim35Q8C006 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim35Q8C006 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim35Q8C006 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim35Q8C006 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim35Q8C006 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim35Q8C006 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim35Q8C006 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim35Q8C006 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trim35Q8C006 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim35Q8C006 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim35Q8C006 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms