Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Gm13888-201ENSMUST00000119148 422 ntBASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Gm11700-201ENSMUST00000119409 403 ntBASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Gm12029-201ENSMUST00000120073 832 ntBASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Gm11660-201ENSMUST00000120955 412 ntBASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Gm9797-202ENSMUST00000218003 294 ntBASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rab11fip4Q8BQP8 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Mir7686-201ENSMUST00000200604 57 ntBASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rab11fip4Q8BQP8 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Rab11fip4Q8BQP8 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rab11fip4Q8BQP8 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.77□□□□□ -0.36
Rab11fip4Q8BQP8 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rab11fip4Q8BQP8 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Rab11fip4Q8BQP8 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rab11fip4Q8BQP8 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rab11fip4Q8BQP8 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rab11fip4Q8BQP8 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rab11fip4Q8BQP8 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab11fip4Q8BQP8 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Rab11fip4Q8BQP8 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rab11fip4Q8BQP8 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Rab11fip4Q8BQP8 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Rab11fip4Q8BQP8 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.77□□□□□ -0.37
Rab11fip4Q8BQP8 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rab11fip4Q8BQP8 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms