Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Vps13b-201ENSMUST00000048646 13757 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Gm37084-201ENSMUST00000191688 5898 ntBASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Gm1335-201ENSMUST00000121653 386 ntBASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Rprl1-201ENSMUST00000158050 327 ntBASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Gm26927-201ENSMUST00000182385 965 ntBASIC9.47□□□□□ -0.89
Smco3Q8BQM7 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Gm807-202ENSMUST00000224929 408 ntBASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 AC129336.2-201ENSMUST00000218053 3086 ntBASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smco3Q8BQM7 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smco3Q8BQM7 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smco3Q8BQM7 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smco3Q8BQM7 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smco3Q8BQM7 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Smco3Q8BQM7 Nrp2-206ENSMUST00000114157 6357 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smco3Q8BQM7 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smco3Q8BQM7 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smco3Q8BQM7 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smco3Q8BQM7 Dclk1-203ENSMUST00000167204 6025 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smco3Q8BQM7 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.89
Smco3Q8BQM7 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.89
Smco3Q8BQM7 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Smco3Q8BQM7 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smco3Q8BQM7 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smco3Q8BQM7 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smco3Q8BQM7 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC9.46□□□□□ -0.89
Smco3Q8BQM7 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smco3Q8BQM7 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smco3Q8BQM7 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smco3Q8BQM7 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC9.46□□□□□ -0.89
Smco3Q8BQM7 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Gm11298-201ENSMUST00000120503 1799 ntBASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Gm6091-201ENSMUST00000098307 165 ntBASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Snhg11-201ENSMUST00000109488 5864 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smco3Q8BQM7 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms