Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Gm17827-201ENSMUST00000211825 742 ntBASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Gm6082-201ENSMUST00000215204 454 ntBASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc40Q8BI79 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
Ccdc40Q8BI79 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Ccdc40Q8BI79 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Gm13996-201ENSMUST00000118456 430 ntBASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Gm11700-201ENSMUST00000119409 403 ntBASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Gm8343-201ENSMUST00000182705 994 ntBASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Gm4157-201ENSMUST00000211647 679 ntBASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc40Q8BI79 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Gm14130-201ENSMUST00000118417 987 ntBASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Gm29615-201ENSMUST00000185371 697 ntBASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Gm28224-201ENSMUST00000186078 697 ntBASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Gm29001-201ENSMUST00000186177 697 ntBASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Gm28292-201ENSMUST00000186593 697 ntBASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Gm28101-201ENSMUST00000187608 697 ntBASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Gm29076-201ENSMUST00000187689 697 ntBASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Gm28302-201ENSMUST00000187931 697 ntBASIC12.07□□□□□ -0.48
Ccdc40Q8BI79 Gm28646-201ENSMUST00000188220 697 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms