Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 AC154757.2-201ENSMUST00000228885 743 ntBASIC11.32□□□□□ -0.6
Ccdc116Q80X53 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.31□□□□□ -0.6
Ccdc116Q80X53 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Gm25025-201ENSMUST00000175018 111 ntBASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Gm38151-201ENSMUST00000195085 289 ntBASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.31□□□□□ -0.6
Ccdc116Q80X53 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Gm45575-201ENSMUST00000210283 548 ntBASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Gm8385-201ENSMUST00000058999 643 ntBASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccdc116Q80X53 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.3□□□□□ -0.6
Ccdc116Q80X53 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms