Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.04□□□□□ -0.64
Vrk1Q80X41 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.04□□□□□ -0.64
Vrk1Q80X41 Gm14219-201ENSMUST00000120414 288 ntBASIC11.04□□□□□ -0.64
Vrk1Q80X41 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Gm6407-201ENSMUST00000176468 549 ntBASIC11.04□□□□□ -0.64
Vrk1Q80X41 Gm26134-201ENSMUST00000178484 110 ntBASIC11.04□□□□□ -0.64
Vrk1Q80X41 Gm7741-201ENSMUST00000181445 989 ntBASIC11.04□□□□□ -0.64
Vrk1Q80X41 Mir8093-201ENSMUST00000185043 137 ntBASIC11.04□□□□□ -0.64
Vrk1Q80X41 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Vrk1Q80X41 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.04□□□□□ -0.64
Vrk1Q80X41 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.04□□□□□ -0.64
Vrk1Q80X41 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.03□□□□□ -0.64
Vrk1Q80X41 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Gm23218-201ENSMUST00000158124 276 ntBASIC11.03□□□□□ -0.64
Vrk1Q80X41 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.03□□□□□ -0.64
Vrk1Q80X41 Gm22877-201ENSMUST00000175451 105 ntBASIC11.03□□□□□ -0.64
Vrk1Q80X41 Mir6407-201ENSMUST00000184510 101 ntBASIC11.03□□□□□ -0.64
Vrk1Q80X41 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Gm37826-201ENSMUST00000195329 322 ntBASIC11.03□□□□□ -0.64
Vrk1Q80X41 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Gm3619-201ENSMUST00000219947 775 ntBASIC11.03□□□□□ -0.64
Vrk1Q80X41 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.03□□□□□ -0.64
Vrk1Q80X41 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.03□□□□□ -0.64
Vrk1Q80X41 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Vrk1Q80X41 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Vrk1Q80X41 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Vrk1Q80X41 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.02□□□□□ -0.64
Vrk1Q80X41 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Vrk1Q80X41 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Vrk1Q80X41 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Vrk1Q80X41 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Vrk1Q80X41 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Vrk1Q80X41 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.02□□□□□ -0.64
Vrk1Q80X41 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms