Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Gm25076-201ENSMUST00000104098 132 ntBASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Gm15615-201ENSMUST00000118876 198 ntBASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Gm16071-201ENSMUST00000119589 793 ntBASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Gm1848-201ENSMUST00000120711 789 ntBASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Gm11244-201ENSMUST00000121243 237 ntBASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Gm13366-201ENSMUST00000122198 970 ntBASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Mir7032-201ENSMUST00000185154 79 ntBASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Gm17826-201ENSMUST00000189720 798 ntBASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Gm45574-201ENSMUST00000210921 331 ntBASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 CT010431.1-201ENSMUST00000221249 1080 ntBASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Gm18065-201ENSMUST00000221395 526 ntBASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Gm9358-201ENSMUST00000183067 927 ntBASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Gm43084-201ENSMUST00000200696 947 ntBASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Olfr584-201ENSMUST00000098210 964 ntBASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh19Q80TF3 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh19Q80TF3 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms