Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ush1gQ80T11 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ush1gQ80T11 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ush1gQ80T11 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ush1gQ80T11 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.64□□□□□ -0.39
Ush1gQ80T11 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ush1gQ80T11 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Ush1gQ80T11 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Ush1gQ80T11 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ush1gQ80T11 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Gm23272-201ENSMUST00000104053 129 ntBASIC12.63□□□□□ -0.39
Ush1gQ80T11 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Gm11700-201ENSMUST00000119409 403 ntBASIC12.63□□□□□ -0.39
Ush1gQ80T11 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Gm8342-201ENSMUST00000209839 757 ntBASIC12.63□□□□□ -0.39
Ush1gQ80T11 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Gm9111-201ENSMUST00000219394 709 ntBASIC12.63□□□□□ -0.39
Ush1gQ80T11 Gm5805-201ENSMUST00000072779 456 ntBASIC12.63□□□□□ -0.39
Ush1gQ80T11 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Ush1gQ80T11 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Gm11980-201ENSMUST00000121445 986 ntBASIC12.62□□□□□ -0.39
Ush1gQ80T11 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Gm9135-201ENSMUST00000182963 990 ntBASIC12.62□□□□□ -0.39
Ush1gQ80T11 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.62□□□□□ -0.39
Ush1gQ80T11 Gm35713-201ENSMUST00000210516 199 ntBASIC12.62□□□□□ -0.39
Ush1gQ80T11 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.62□□□□□ -0.39
Ush1gQ80T11 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.62□□□□□ -0.39
Ush1gQ80T11 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ush1gQ80T11 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.62□□□□□ -0.39
Ush1gQ80T11 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.62□□□□□ -0.39
Ush1gQ80T11 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms