Protein–RNA interactions for Protein: Q6PIJ4

Nfrkb, Nuclear factor related to kappa-B-binding protein, mousemouse

Known RBP Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfrkbQ6PIJ4 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NfrkbQ6PIJ4 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NfrkbQ6PIJ4 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
NfrkbQ6PIJ4 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
NfrkbQ6PIJ4 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
NfrkbQ6PIJ4 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NfrkbQ6PIJ4 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NfrkbQ6PIJ4 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NfrkbQ6PIJ4 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NfrkbQ6PIJ4 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NfrkbQ6PIJ4 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NfrkbQ6PIJ4 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NfrkbQ6PIJ4 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
NfrkbQ6PIJ4 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.02□□□□□ -0.33
NfrkbQ6PIJ4 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NfrkbQ6PIJ4 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.02□□□□□ -0.33
NfrkbQ6PIJ4 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NfrkbQ6PIJ4 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NfrkbQ6PIJ4 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
NfrkbQ6PIJ4 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NfrkbQ6PIJ4 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
NfrkbQ6PIJ4 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
NfrkbQ6PIJ4 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
NfrkbQ6PIJ4 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
NfrkbQ6PIJ4 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Gm11422-201ENSMUST00000118925 1103 ntBASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Gm14441-201ENSMUST00000121960 540 ntBASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Gm7741-201ENSMUST00000181445 989 ntBASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NfrkbQ6PIJ4 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13□□□□□ -0.33
NfrkbQ6PIJ4 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Gm45758-201ENSMUST00000212448 1006 ntBASIC13□□□□□ -0.33
NfrkbQ6PIJ4 AC134869.4-202ENSMUST00000224350 837 ntBASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NfrkbQ6PIJ4 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms