Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Gm23270-201ENSMUST00000104055 131 ntBASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Gm43962-201ENSMUST00000203898 190 ntBASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Gm45598-202ENSMUST00000210719 986 ntBASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 CT009738.1-201ENSMUST00000219031 809 ntBASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Gzmn-202ENSMUST00000225535 989 ntBASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Scaf4Q6PFF0 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Scaf4Q6PFF0 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.59
Scaf4Q6PFF0 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Gm15370-201ENSMUST00000117158 253 ntBASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Snora78-201ENSMUST00000158630 128 ntBASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Scaf4Q6PFF0 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms