Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.45□□□□□ -0.26
Smarcc2Q6PDG5 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc2Q6PDG5 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc2Q6PDG5 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc2Q6PDG5 Erich3-203ENSMUST00000189969 3460 ntBASIC13.45□□□□□ -0.26
Smarcc2Q6PDG5 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc2Q6PDG5 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc2Q6PDG5 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc2Q6PDG5 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc2Q6PDG5 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC13.45□□□□□ -0.26
Smarcc2Q6PDG5 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc2Q6PDG5 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Gm10051-201ENSMUST00000145209 414 ntBASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Gm3329-201ENSMUST00000159873 556 ntBASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Gm37986-201ENSMUST00000193285 383 ntBASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Ginm1-202ENSMUST00000065124 300 ntBASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc2Q6PDG5 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Adgrv1-214ENSMUST00000224088 1492 ntBASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Gm13263-201ENSMUST00000121271 838 ntBASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Gm22902-201ENSMUST00000158488 302 ntBASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Gm10807-201ENSMUST00000177134 795 ntBASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Gm43127-201ENSMUST00000195890 2789 ntBASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Gm9785-201ENSMUST00000062642 1006 ntBASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Smarcc2Q6PDG5 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms