Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
NipblQ6KCD5 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC8.78□□□□□ -1
NipblQ6KCD5 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC8.78□□□□□ -1
NipblQ6KCD5 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
NipblQ6KCD5 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
NipblQ6KCD5 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
NipblQ6KCD5 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
NipblQ6KCD5 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
NipblQ6KCD5 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC8.78□□□□□ -1
NipblQ6KCD5 Gm1840-201ENSMUST00000051687 1432 ntBASIC8.78□□□□□ -1
NipblQ6KCD5 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
NipblQ6KCD5 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
NipblQ6KCD5 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
NipblQ6KCD5 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC8.78□□□□□ -1
NipblQ6KCD5 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
NipblQ6KCD5 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC8.78□□□□□ -1
NipblQ6KCD5 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC8.78□□□□□ -1
NipblQ6KCD5 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC8.78□□□□□ -1
NipblQ6KCD5 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC8.78□□□□□ -1
NipblQ6KCD5 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
NipblQ6KCD5 Gm5996-201ENSMUST00000211110 718 ntBASIC8.78□□□□□ -1
NipblQ6KCD5 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
NipblQ6KCD5 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
NipblQ6KCD5 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
NipblQ6KCD5 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
NipblQ6KCD5 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
NipblQ6KCD5 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
NipblQ6KCD5 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
NipblQ6KCD5 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1
NipblQ6KCD5 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC8.77□□□□□ -1
NipblQ6KCD5 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1
NipblQ6KCD5 AC156031.2-201ENSMUST00000213107 3310 ntBASIC8.77□□□□□ -1
NipblQ6KCD5 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC8.77□□□□□ -1
NipblQ6KCD5 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC8.77□□□□□ -1
NipblQ6KCD5 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
NipblQ6KCD5 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC8.77□□□□□ -1
NipblQ6KCD5 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
NipblQ6KCD5 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC8.77□□□□□ -1
NipblQ6KCD5 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
NipblQ6KCD5 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
NipblQ6KCD5 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1
NipblQ6KCD5 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC8.77□□□□□ -1
NipblQ6KCD5 Ssr1-203ENSMUST00000225246 1825 ntBASIC8.77□□□□□ -1.01
NipblQ6KCD5 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Gm14227-201ENSMUST00000119431 629 ntBASIC8.77□□□□□ -1.01
NipblQ6KCD5 Gm12499-201ENSMUST00000121961 546 ntBASIC8.77□□□□□ -1.01
NipblQ6KCD5 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Gm26982-201ENSMUST00000182250 1151 ntBASIC8.77□□□□□ -1.01
NipblQ6KCD5 Gm5267-201ENSMUST00000191574 1045 ntBASIC8.77□□□□□ -1.01
NipblQ6KCD5 Gm36980-201ENSMUST00000195643 622 ntBASIC8.77□□□□□ -1.01
NipblQ6KCD5 AC098716.1-201ENSMUST00000213527 703 ntBASIC8.77□□□□□ -1.01
NipblQ6KCD5 AC164614.1-201ENSMUST00000216038 397 ntBASIC8.77□□□□□ -1.01
NipblQ6KCD5 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC8.77□□□□□ -1.01
NipblQ6KCD5 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Zfp389-202ENSMUST00000224437 1234 ntBASIC8.77□□□□□ -1.01
NipblQ6KCD5 AC103672.1-201ENSMUST00000227502 365 ntBASIC8.77□□□□□ -1.01
NipblQ6KCD5 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC8.77□□□□□ -1.01
NipblQ6KCD5 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC8.77□□□□□ -1.01
NipblQ6KCD5 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
NipblQ6KCD5 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
NipblQ6KCD5 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC8.77□□□□□ -1.01
NipblQ6KCD5 AC134248.1-201ENSMUST00000216113 1176 ntBASIC8.77□□□□□ -1.01
NipblQ6KCD5 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Gm19692-201ENSMUST00000203856 2084 ntBASIC8.77□□□□□ -1.01
NipblQ6KCD5 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
NipblQ6KCD5 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
NipblQ6KCD5 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
NipblQ6KCD5 Ntrk2-204ENSMUST00000224259 3049 ntBASIC8.76□□□□□ -1.01
NipblQ6KCD5 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
NipblQ6KCD5 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
NipblQ6KCD5 Gm14005-210ENSMUST00000225087 1413 ntBASIC8.76□□□□□ -1.01
NipblQ6KCD5 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
NipblQ6KCD5 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC8.76□□□□□ -1.01
NipblQ6KCD5 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
NipblQ6KCD5 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
NipblQ6KCD5 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
NipblQ6KCD5 Gm8146-201ENSMUST00000192106 1847 ntBASIC8.76□□□□□ -1.01
NipblQ6KCD5 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms