Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdzrn3Q69ZS0 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pdzrn3Q69ZS0 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pdzrn3Q69ZS0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pdzrn3Q69ZS0 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pdzrn3Q69ZS0 Gm18986-201ENSMUST00000216029 1986 ntBASIC14.12□□□□□ -0.15
Pdzrn3Q69ZS0 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdzrn3Q69ZS0 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.12□□□□□ -0.15
Pdzrn3Q69ZS0 Gm6655-201ENSMUST00000201932 1309 ntBASIC14.12□□□□□ -0.15
Pdzrn3Q69ZS0 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdzrn3Q69ZS0 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdzrn3Q69ZS0 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
Pdzrn3Q69ZS0 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdzrn3Q69ZS0 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Gm45199-201ENSMUST00000207640 1507 ntBASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Gm11980-201ENSMUST00000121445 986 ntBASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Gm17798-201ENSMUST00000182282 1035 ntBASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Gm37849-201ENSMUST00000194722 1881 ntBASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Gm3017-201ENSMUST00000203603 1126 ntBASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Mir483-201ENSMUST00000093631 73 ntBASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pdzrn3Q69ZS0 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Gm14892-201ENSMUST00000117636 267 ntBASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Gm12990-201ENSMUST00000120372 468 ntBASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Gm11244-201ENSMUST00000121243 237 ntBASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Gm35713-201ENSMUST00000210516 199 ntBASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Gm5805-201ENSMUST00000072779 456 ntBASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdzrn3Q69ZS0 Gm42498-201ENSMUST00000199981 1372 ntBASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pdzrn3Q69ZS0 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms