Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gli3Q61602 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gli3Q61602 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gli3Q61602 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gli3Q61602 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gli3Q61602 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gli3Q61602 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Gli3Q61602 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Gli3Q61602 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 Gm11700-201ENSMUST00000119409 403 ntBASIC15.11■□□□□ 0.01
Gli3Q61602 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC15.11■□□□□ 0.01
Gli3Q61602 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC15.11■□□□□ 0.01
Gli3Q61602 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Gli3Q61602 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 AC122459.4-201ENSMUST00000228654 551 ntBASIC15.11■□□□□ 0.01
Gli3Q61602 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 Krtap21-1-201ENSMUST00000078422 748 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Gli3Q61602 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Gli3Q61602 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Gli3Q61602 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Gli3Q61602 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC15.11■□□□□ 0.01
Gli3Q61602 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Gli3Q61602 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 Cog5-201ENSMUST00000036862 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC15.11■□□□□ 0.01
Gli3Q61602 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Gli3Q61602 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC15.11■□□□□ 0.01
Gli3Q61602 Gm19692-201ENSMUST00000203856 2084 ntBASIC15.11■□□□□ 0.01
Gli3Q61602 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC15.11■□□□□ 0.01
Gli3Q61602 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC15.11■□□□□ 0.01
Gli3Q61602 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Gli3Q61602 Gm5274-201ENSMUST00000182641 1003 ntBASIC15.11■□□□□ 0.01
Gli3Q61602 Gm29783-201ENSMUST00000219398 369 ntBASIC15.11■□□□□ 0.01
Gli3Q61602 Gm18783-201ENSMUST00000220465 1151 ntBASIC15.11■□□□□ 0.01
Gli3Q61602 Gm8557-201ENSMUST00000220777 475 ntBASIC15.11■□□□□ 0.01
Gli3Q61602 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Gli3Q61602 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gli3Q61602 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gli3Q61602 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gli3Q61602 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gli3Q61602 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gli3Q61602 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Gli3Q61602 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gli3Q61602 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Gli3Q61602 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC15.1■□□□□ 0.01
Gli3Q61602 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Gli3Q61602 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Gli3Q61602 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gli3Q61602 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gli3Q61602 Gm45847-201ENSMUST00000209402 1880 ntTSL 3 BASIC15.1■□□□□ 0.01
Gli3Q61602 Cdadc1-202ENSMUST00000056997 2202 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gli3Q61602 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.1■□□□□ 0.01
Gli3Q61602 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gli3Q61602 Snora68-201ENSMUST00000104375 131 ntBASIC15.1■□□□□ 0.01
Gli3Q61602 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gli3Q61602 Gm15539-201ENSMUST00000118452 566 ntBASIC15.1■□□□□ 0.01
Gli3Q61602 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC15.1■□□□□ 0.01
Gli3Q61602 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Gli3Q61602 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Gli3Q61602 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gli3Q61602 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC15.1■□□□□ 0.01
Gli3Q61602 AC165092.1-201ENSMUST00000224018 486 ntBASIC15.1■□□□□ 0.01
Gli3Q61602 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Gli3Q61602 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gli3Q61602 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC15.1■□□□□ 0.01
Gli3Q61602 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gli3Q61602 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gli3Q61602 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gli3Q61602 Gm43242-201ENSMUST00000199507 1776 ntBASIC15.1■□□□□ 0.01
Gli3Q61602 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Gli3Q61602 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gli3Q61602 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC15.09■□□□□ 0.01
Gli3Q61602 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gli3Q61602 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gli3Q61602 Gm18986-201ENSMUST00000216029 1986 ntBASIC15.09■□□□□ 0.01
Gli3Q61602 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gli3Q61602 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
Gli3Q61602 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms