Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col12a1Q60847 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.06□□□□□ -0.64
Col12a1Q60847 Gm11919-201ENSMUST00000117609 721 ntBASIC11.06□□□□□ -0.64
Col12a1Q60847 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Col12a1Q60847 Atad3aos-204ENSMUST00000174185 482 ntTSL 3 BASIC11.06□□□□□ -0.64
Col12a1Q60847 Gm43965-201ENSMUST00000203779 789 ntBASIC11.06□□□□□ -0.64
Col12a1Q60847 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC11.06□□□□□ -0.64
Col12a1Q60847 AC164978.2-201ENSMUST00000226645 857 ntBASIC11.06□□□□□ -0.64
Col12a1Q60847 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col12a1Q60847 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col12a1Q60847 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col12a1Q60847 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col12a1Q60847 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col12a1Q60847 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Col12a1Q60847 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col12a1Q60847 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col12a1Q60847 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Col12a1Q60847 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col12a1Q60847 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col12a1Q60847 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC11.06□□□□□ -0.64
Col12a1Q60847 Mir704-201ENSMUST00000102106 77 ntBASIC11.06□□□□□ -0.64
Col12a1Q60847 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC11.06□□□□□ -0.64
Col12a1Q60847 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC11.06□□□□□ -0.64
Col12a1Q60847 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC11.06□□□□□ -0.64
Col12a1Q60847 Gm22616-201ENSMUST00000179783 100 ntBASIC11.06□□□□□ -0.64
Col12a1Q60847 Gm8707-201ENSMUST00000183325 980 ntBASIC11.06□□□□□ -0.64
Col12a1Q60847 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC11.06□□□□□ -0.64
Col12a1Q60847 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col12a1Q60847 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col12a1Q60847 AC123698.1-201ENSMUST00000227090 402 ntBASIC11.06□□□□□ -0.64
Col12a1Q60847 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.06□□□□□ -0.64
Col12a1Q60847 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col12a1Q60847 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.06□□□□□ -0.64
Col12a1Q60847 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col12a1Q60847 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Col12a1Q60847 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col12a1Q60847 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col12a1Q60847 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col12a1Q60847 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col12a1Q60847 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col12a1Q60847 AC154197.1-201ENSMUST00000225136 1382 ntBASIC11.05□□□□□ -0.64
Col12a1Q60847 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col12a1Q60847 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col12a1Q60847 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col12a1Q60847 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col12a1Q60847 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC11.05□□□□□ -0.64
Col12a1Q60847 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.05□□□□□ -0.64
Col12a1Q60847 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col12a1Q60847 Gm13377-201ENSMUST00000137984 683 ntBASIC11.05□□□□□ -0.64
Col12a1Q60847 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
Col12a1Q60847 Gm17147-201ENSMUST00000164176 432 ntBASIC11.05□□□□□ -0.64
Col12a1Q60847 AC127583.1-201ENSMUST00000224351 540 ntBASIC11.05□□□□□ -0.64
Col12a1Q60847 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.05□□□□□ -0.64
Col12a1Q60847 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col12a1Q60847 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col12a1Q60847 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col12a1Q60847 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col12a1Q60847 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col12a1Q60847 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Col12a1Q60847 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col12a1Q60847 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col12a1Q60847 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col12a1Q60847 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col12a1Q60847 Gm5764-201ENSMUST00000118817 885 ntBASIC11.05□□□□□ -0.64
Col12a1Q60847 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Col12a1Q60847 Gm25694-201ENSMUST00000175448 282 ntBASIC11.05□□□□□ -0.64
Col12a1Q60847 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Col12a1Q60847 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col12a1Q60847 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col12a1Q60847 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.05□□□□□ -0.64
Col12a1Q60847 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Col12a1Q60847 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col12a1Q60847 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col12a1Q60847 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Col12a1Q60847 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col12a1Q60847 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Col12a1Q60847 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col12a1Q60847 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col12a1Q60847 Gm12463-201ENSMUST00000118271 849 ntBASIC11.04□□□□□ -0.64
Col12a1Q60847 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC11.04□□□□□ -0.64
Col12a1Q60847 Gm16288-201ENSMUST00000137940 367 ntBASIC11.04□□□□□ -0.64
Col12a1Q60847 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col12a1Q60847 Gm43851-201ENSMUST00000200726 327 ntTSL 3 BASIC11.04□□□□□ -0.64
Col12a1Q60847 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC11.04□□□□□ -0.64
Col12a1Q60847 Gm44640-201ENSMUST00000206894 247 ntBASIC11.04□□□□□ -0.64
Col12a1Q60847 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col12a1Q60847 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col12a1Q60847 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Col12a1Q60847 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col12a1Q60847 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col12a1Q60847 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col12a1Q60847 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col12a1Q60847 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col12a1Q60847 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col12a1Q60847 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Col12a1Q60847 Gm14227-201ENSMUST00000119431 629 ntBASIC11.04□□□□□ -0.64
Col12a1Q60847 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC11.04□□□□□ -0.64
Col12a1Q60847 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.04□□□□□ -0.64
Col12a1Q60847 Gm6038-201ENSMUST00000154310 948 ntBASIC11.04□□□□□ -0.64
Col12a1Q60847 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms