Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Gm45053-201ENSMUST00000206112 2499 ntBASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Gm14071-201ENSMUST00000117817 509 ntBASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Gm8566-201ENSMUST00000120174 465 ntBASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Gm26047-201ENSMUST00000157308 113 ntBASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Gm2260-201ENSMUST00000184965 657 ntBASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Gm4857-201ENSMUST00000192718 785 ntBASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Gstp-ps-201ENSMUST00000195526 631 ntBASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Gm26047-202ENSMUST00000198840 115 ntBASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 AC151275.1-201ENSMUST00000224870 585 ntBASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav5d-4Q5R1F6 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Gm37105-201ENSMUST00000192251 2085 ntBASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Gm9129-201ENSMUST00000218173 1689 ntBASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Gm14277-201ENSMUST00000121195 360 ntBASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Gm14017-201ENSMUST00000121934 386 ntBASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Gm8815-201ENSMUST00000173809 620 ntBASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Gm5852-201ENSMUST00000194119 1021 ntBASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Gm5714-201ENSMUST00000197343 566 ntBASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 CT030182.1-201ENSMUST00000225935 533 ntBASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Trav5d-4Q5R1F6 Gm10288-201ENSMUST00000084614 537 ntBASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms