Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rc3h1Q4VGL6 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Gm24398-201ENSMUST00000157870 109 ntBASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Gm45594-201ENSMUST00000211717 241 ntBASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Gm5468-202ENSMUST00000227851 682 ntBASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rc3h1Q4VGL6 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Gm15744-201ENSMUST00000161734 213 ntBASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC13.34□□□□□ -0.27
Rc3h1Q4VGL6 Gm5740-201ENSMUST00000211003 1857 ntBASIC13.33□□□□□ -0.27
Rc3h1Q4VGL6 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rc3h1Q4VGL6 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rc3h1Q4VGL6 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.27
Rc3h1Q4VGL6 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h1Q4VGL6 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h1Q4VGL6 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Rc3h1Q4VGL6 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h1Q4VGL6 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rc3h1Q4VGL6 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rc3h1Q4VGL6 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms