Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Syne3Q4FZC9 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Gm23200-201ENSMUST00000104379 132 ntBASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.24□□□□□ -0.45
Syne3Q4FZC9 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.24□□□□□ -0.45
Syne3Q4FZC9 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Gm26047-201ENSMUST00000157308 113 ntBASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.24□□□□□ -0.45
Syne3Q4FZC9 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Gm26047-202ENSMUST00000198840 115 ntBASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Gm43002-201ENSMUST00000200310 155 ntBASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Syne3Q4FZC9 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Gm8566-201ENSMUST00000120174 465 ntBASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Gm4482-201ENSMUST00000200876 742 ntBASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Syne3Q4FZC9 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syne3Q4FZC9 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms