Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nlrc4Q3UP24 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nlrc4Q3UP24 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nlrc4Q3UP24 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nlrc4Q3UP24 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nlrc4Q3UP24 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nlrc4Q3UP24 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.15□□□□□ -0.46
Nlrc4Q3UP24 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nlrc4Q3UP24 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nlrc4Q3UP24 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nlrc4Q3UP24 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.15□□□□□ -0.46
Nlrc4Q3UP24 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nlrc4Q3UP24 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.15□□□□□ -0.46
Nlrc4Q3UP24 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.15□□□□□ -0.46
Nlrc4Q3UP24 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Nlrc4Q3UP24 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Nlrc4Q3UP24 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.15□□□□□ -0.46
Nlrc4Q3UP24 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.15□□□□□ -0.46
Nlrc4Q3UP24 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nlrc4Q3UP24 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.15□□□□□ -0.47
Nlrc4Q3UP24 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Nlrc4Q3UP24 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Nlrc4Q3UP24 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.15□□□□□ -0.47
Nlrc4Q3UP24 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Erich3-203ENSMUST00000189969 3460 ntBASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Gm15549-201ENSMUST00000121595 622 ntBASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Gm15881-201ENSMUST00000148792 942 ntBASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Mir1943-201ENSMUST00000158276 73 ntBASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Gm3329-201ENSMUST00000159873 556 ntBASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Gm10731-201ENSMUST00000181171 448 ntBASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Gm5996-201ENSMUST00000211110 718 ntBASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nlrc4Q3UP24 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Gm8737-201ENSMUST00000122208 642 ntBASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Gm21092-201ENSMUST00000178995 955 ntBASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Gm37981-201ENSMUST00000194280 535 ntBASIC12.13□□□□□ -0.47
Nlrc4Q3UP24 Gm43966-201ENSMUST00000203301 612 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms