Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.21□□□□□ -0.45
Trim43aQ3TL54 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Uba52-ps-201ENSMUST00000183770 379 ntBASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Gm19187-201ENSMUST00000206781 892 ntBASIC12.21□□□□□ -0.45
Trim43aQ3TL54 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.21□□□□□ -0.45
Trim43aQ3TL54 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim43aQ3TL54 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim43aQ3TL54 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Trim43aQ3TL54 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim43aQ3TL54 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim43aQ3TL54 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trim43aQ3TL54 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim43aQ3TL54 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim43aQ3TL54 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim43aQ3TL54 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim43aQ3TL54 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Trim43aQ3TL54 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim43aQ3TL54 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim43aQ3TL54 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
Trim43aQ3TL54 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.21□□□□□ -0.46
Trim43aQ3TL54 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim43aQ3TL54 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim43aQ3TL54 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim43aQ3TL54 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim43aQ3TL54 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim43aQ3TL54 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.2□□□□□ -0.46
Trim43aQ3TL54 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Gm12463-201ENSMUST00000118271 849 ntBASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Gm15276-201ENSMUST00000145953 498 ntBASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Gm28937-201ENSMUST00000185413 695 ntBASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Gm3096-201ENSMUST00000185770 364 ntBASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Gm29400-201ENSMUST00000187208 695 ntBASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Gm28662-201ENSMUST00000188446 695 ntBASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Gm28251-201ENSMUST00000188835 695 ntBASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Gm37318-201ENSMUST00000194325 695 ntBASIC12.2□□□□□ -0.46
Trim43aQ3TL54 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Gm38017-201ENSMUST00000194768 695 ntBASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Gm37287-201ENSMUST00000195449 695 ntBASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Gm37793-201ENSMUST00000195548 695 ntBASIC12.2□□□□□ -0.46
Trim43aQ3TL54 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms