Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm26047-201ENSMUST00000157308 113 ntBASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm20482-202ENSMUST00000174729 825 ntBASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm29615-201ENSMUST00000185371 697 ntBASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm28224-201ENSMUST00000186078 697 ntBASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm29001-201ENSMUST00000186177 697 ntBASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm28292-201ENSMUST00000186593 697 ntBASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm28101-201ENSMUST00000187608 697 ntBASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm29076-201ENSMUST00000187689 697 ntBASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm28302-201ENSMUST00000187931 697 ntBASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm28646-201ENSMUST00000188220 697 ntBASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm28205-201ENSMUST00000189177 697 ntBASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm3332-201ENSMUST00000189337 928 ntBASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm29032-201ENSMUST00000189797 697 ntBASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm28695-201ENSMUST00000190300 697 ntBASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm37448-201ENSMUST00000192795 697 ntBASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm5714-201ENSMUST00000197343 566 ntBASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm18038-201ENSMUST00000197900 485 ntBASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm26047-202ENSMUST00000198840 115 ntBASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cul4aQ3TCH7 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Rgr-203ENSMUST00000225070 4704 ntBASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Gm12857-201ENSMUST00000117678 592 ntBASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Gm14381-201ENSMUST00000122105 414 ntBASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Gm4978-201ENSMUST00000071565 801 ntBASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cul4aQ3TCH7 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms