Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Gm18733-202ENSMUST00000174447 401 ntBASIC12.28□□□□□ -0.44
Col19a1Q0VF58 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Gm43966-201ENSMUST00000203301 612 ntBASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col19a1Q0VF58 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
Col19a1Q0VF58 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Col19a1Q0VF58 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC12.27□□□□□ -0.44
Col19a1Q0VF58 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col19a1Q0VF58 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col19a1Q0VF58 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Col19a1Q0VF58 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col19a1Q0VF58 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col19a1Q0VF58 Gm44740-201ENSMUST00000205603 1614 ntBASIC12.27□□□□□ -0.44
Col19a1Q0VF58 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col19a1Q0VF58 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Gm11540-201ENSMUST00000117457 780 ntBASIC12.27□□□□□ -0.45
Col19a1Q0VF58 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Gm5808-201ENSMUST00000178090 357 ntBASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Gm5976-201ENSMUST00000180794 996 ntBASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Gm5190-201ENSMUST00000192434 357 ntBASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col19a1Q0VF58 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Col19a1Q0VF58 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col19a1Q0VF58 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col19a1Q0VF58 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.26□□□□□ -0.45
Col19a1Q0VF58 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col19a1Q0VF58 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col19a1Q0VF58 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.26□□□□□ -0.45
Col19a1Q0VF58 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col19a1Q0VF58 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col19a1Q0VF58 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.26□□□□□ -0.45
Col19a1Q0VF58 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col19a1Q0VF58 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.26□□□□□ -0.45
Col19a1Q0VF58 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col19a1Q0VF58 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col19a1Q0VF58 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Col19a1Q0VF58 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Col19a1Q0VF58 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.26□□□□□ -0.45
Col19a1Q0VF58 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Col19a1Q0VF58 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col19a1Q0VF58 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Col19a1Q0VF58 Gm7928-201ENSMUST00000181249 701 ntBASIC12.26□□□□□ -0.45
Col19a1Q0VF58 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms