Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm16329-201ENSMUST00000148174 371 ntBASIC10.28□□□□□ -0.76
Chd8Q09XV5 Gm5706-201ENSMUST00000181525 993 ntBASIC10.28□□□□□ -0.76
Chd8Q09XV5 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.28□□□□□ -0.76
Chd8Q09XV5 4933439N14Rik-201ENSMUST00000211062 1087 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Chd8Q09XV5 AC174647.1-201ENSMUST00000227419 1271 ntBASIC10.28□□□□□ -0.76
Chd8Q09XV5 3110009E18Rik-201ENSMUST00000027637 1007 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Gm32072-201ENSMUST00000200803 1434 ntBASIC10.28□□□□□ -0.76
Chd8Q09XV5 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.28□□□□□ -0.76
Chd8Q09XV5 Gm11231-201ENSMUST00000117895 1706 ntBASIC10.28□□□□□ -0.76
Chd8Q09XV5 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Chd8Q09XV5 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Chd8Q09XV5 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Chd8Q09XV5 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Chd8Q09XV5 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Chd8Q09XV5 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Chd8Q09XV5 Fuom-202ENSMUST00000120034 680 ntTSL 3 BASIC10.27□□□□□ -0.76
Chd8Q09XV5 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC10.27□□□□□ -0.76
Chd8Q09XV5 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC10.27□□□□□ -0.76
Chd8Q09XV5 Gm25343-201ENSMUST00000157460 107 ntBASIC10.27□□□□□ -0.76
Chd8Q09XV5 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Chd8Q09XV5 Gm16470-201ENSMUST00000182456 998 ntBASIC10.27□□□□□ -0.76
Chd8Q09XV5 Gm32496-201ENSMUST00000191988 702 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Chd8Q09XV5 Gm44716-201ENSMUST00000209007 710 ntBASIC10.27□□□□□ -0.76
Chd8Q09XV5 Gm11437-201ENSMUST00000050771 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Chd8Q09XV5 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
Chd8Q09XV5 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Chd8Q09XV5 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Chd8Q09XV5 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Chd8Q09XV5 Sav1-201ENSMUST00000021467 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Chd8Q09XV5 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Chd8Q09XV5 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Chd8Q09XV5 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Chd8Q09XV5 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Chd8Q09XV5 Gm14538-201ENSMUST00000122019 1327 ntBASIC10.27□□□□□ -0.76
Chd8Q09XV5 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Chd8Q09XV5 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Chd8Q09XV5 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
Chd8Q09XV5 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Chd8Q09XV5 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Chd8Q09XV5 Romo1-204ENSMUST00000119950 379 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Chd8Q09XV5 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC10.27□□□□□ -0.77
Chd8Q09XV5 Gm15641-201ENSMUST00000161407 670 ntTSL 3 BASIC10.27□□□□□ -0.77
Chd8Q09XV5 Nuf2-203ENSMUST00000192248 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Chd8Q09XV5 Calb2-202ENSMUST00000212297 1080 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Chd8Q09XV5 Gm17980-201ENSMUST00000217977 2349 ntBASIC10.27□□□□□ -0.77
Chd8Q09XV5 AC160931.1-201ENSMUST00000223298 413 ntTSL 3 BASIC10.27□□□□□ -0.77
Chd8Q09XV5 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Chd8Q09XV5 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Chd8Q09XV5 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.27□□□□□ -0.77
Chd8Q09XV5 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Chd8Q09XV5 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Chd8Q09XV5 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Chd8Q09XV5 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Chd8Q09XV5 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Chd8Q09XV5 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Chd8Q09XV5 Dcstamp-205ENSMUST00000228556 1684 ntBASIC10.27□□□□□ -0.77
Chd8Q09XV5 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.27□□□□□ -0.77
Chd8Q09XV5 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.27□□□□□ -0.77
Chd8Q09XV5 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.27□□□□□ -0.77
Chd8Q09XV5 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Chd8Q09XV5 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.27□□□□□ -0.77
Chd8Q09XV5 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Chd8Q09XV5 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd8Q09XV5 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd8Q09XV5 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd8Q09XV5 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Chd8Q09XV5 Myl7-201ENSMUST00000102921 590 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd8Q09XV5 Scgb1b7-201ENSMUST00000108097 419 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd8Q09XV5 Gm15208-201ENSMUST00000134448 493 ntTSL 3 BASIC10.26□□□□□ -0.77
Chd8Q09XV5 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Chd8Q09XV5 Gm42917-201ENSMUST00000200668 928 ntTSL 3 BASIC10.26□□□□□ -0.77
Chd8Q09XV5 AC108416.3-201ENSMUST00000226148 557 ntBASIC10.26□□□□□ -0.77
Chd8Q09XV5 AC158519.1-201ENSMUST00000228615 179 ntBASIC10.26□□□□□ -0.77
Chd8Q09XV5 Gm10689-201ENSMUST00000098864 432 ntBASIC10.26□□□□□ -0.77
Chd8Q09XV5 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd8Q09XV5 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Chd8Q09XV5 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd8Q09XV5 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Chd8Q09XV5 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd8Q09XV5 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC10.26□□□□□ -0.77
Chd8Q09XV5 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd8Q09XV5 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd8Q09XV5 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC10.26□□□□□ -0.77
Chd8Q09XV5 AC160138.2-201ENSMUST00000220255 1531 ntBASIC10.26□□□□□ -0.77
Chd8Q09XV5 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd8Q09XV5 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Chd8Q09XV5 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.26□□□□□ -0.77
Chd8Q09XV5 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms