Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn3Q07409 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn3Q07409 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn3Q07409 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn3Q07409 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn3Q07409 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn3Q07409 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn3Q07409 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn3Q07409 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn3Q07409 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn3Q07409 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.12□□□□□ -0.47
Cntn3Q07409 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn3Q07409 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.12□□□□□ -0.47
Cntn3Q07409 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn3Q07409 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Cntn3Q07409 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn3Q07409 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn3Q07409 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn3Q07409 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cntn3Q07409 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cntn3Q07409 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.11□□□□□ -0.47
Cntn3Q07409 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.11□□□□□ -0.47
Cntn3Q07409 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cntn3Q07409 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Cntn3Q07409 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.11□□□□□ -0.47
Cntn3Q07409 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.11□□□□□ -0.47
Cntn3Q07409 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.11□□□□□ -0.47
Cntn3Q07409 Gm23771-201ENSMUST00000178702 110 ntBASIC12.11□□□□□ -0.47
Cntn3Q07409 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.11□□□□□ -0.47
Cntn3Q07409 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Cntn3Q07409 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Gm37299-201ENSMUST00000193951 826 ntBASIC12.11□□□□□ -0.47
Cntn3Q07409 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.11□□□□□ -0.47
Cntn3Q07409 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC12.11□□□□□ -0.47
Cntn3Q07409 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
Cntn3Q07409 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.11□□□□□ -0.47
Cntn3Q07409 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.11□□□□□ -0.47
Cntn3Q07409 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.11□□□□□ -0.47
Cntn3Q07409 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cntn3Q07409 Snora73b-201ENSMUST00000083419 205 ntBASIC12.11□□□□□ -0.47
Cntn3Q07409 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.11□□□□□ -0.47
Cntn3Q07409 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cntn3Q07409 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Cntn3Q07409 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cntn3Q07409 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.11□□□□□ -0.47
Cntn3Q07409 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cntn3Q07409 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cntn3Q07409 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cntn3Q07409 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cntn3Q07409 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.1□□□□□ -0.47
Cntn3Q07409 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.1□□□□□ -0.47
Cntn3Q07409 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.1□□□□□ -0.47
Cntn3Q07409 Gm6485-201ENSMUST00000160676 439 ntBASIC12.1□□□□□ -0.47
Cntn3Q07409 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cntn3Q07409 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cntn3Q07409 Gm27910-201ENSMUST00000185004 107 ntBASIC12.1□□□□□ -0.47
Cntn3Q07409 Mir7032-201ENSMUST00000185154 79 ntBASIC12.1□□□□□ -0.47
Cntn3Q07409 Gm9645-201ENSMUST00000197131 792 ntBASIC12.1□□□□□ -0.47
Cntn3Q07409 Gm8365-201ENSMUST00000197334 648 ntBASIC12.1□□□□□ -0.47
Cntn3Q07409 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cntn3Q07409 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms