Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
VcpQ01853 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
VcpQ01853 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VcpQ01853 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VcpQ01853 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VcpQ01853 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
VcpQ01853 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
VcpQ01853 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
VcpQ01853 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
VcpQ01853 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.34□□□□□ -0.43
VcpQ01853 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
VcpQ01853 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.34□□□□□ -0.43
VcpQ01853 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
VcpQ01853 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.34□□□□□ -0.43
VcpQ01853 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Gm5419-201ENSMUST00000119301 527 ntBASIC12.34□□□□□ -0.43
VcpQ01853 Gm12990-201ENSMUST00000120372 468 ntBASIC12.34□□□□□ -0.43
VcpQ01853 Gm14219-201ENSMUST00000120414 288 ntBASIC12.34□□□□□ -0.43
VcpQ01853 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.34□□□□□ -0.43
VcpQ01853 Gm11354-201ENSMUST00000121974 422 ntBASIC12.34□□□□□ -0.43
VcpQ01853 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
VcpQ01853 Gm4862-201ENSMUST00000170405 438 ntBASIC12.34□□□□□ -0.43
VcpQ01853 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.34□□□□□ -0.43
VcpQ01853 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Gm10731-201ENSMUST00000181171 448 ntBASIC12.34□□□□□ -0.43
VcpQ01853 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.34□□□□□ -0.43
VcpQ01853 Gm43184-201ENSMUST00000197247 542 ntBASIC12.34□□□□□ -0.43
VcpQ01853 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.34□□□□□ -0.43
VcpQ01853 Gm44980-201ENSMUST00000205826 314 ntBASIC12.34□□□□□ -0.43
VcpQ01853 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Gm35713-201ENSMUST00000210516 199 ntBASIC12.34□□□□□ -0.43
VcpQ01853 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.34□□□□□ -0.43
VcpQ01853 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.34□□□□□ -0.43
VcpQ01853 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.34□□□□□ -0.43
VcpQ01853 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Gm10288-201ENSMUST00000084614 537 ntBASIC12.34□□□□□ -0.43
VcpQ01853 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
VcpQ01853 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.34□□□□□ -0.43
VcpQ01853 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VcpQ01853 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
VcpQ01853 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
VcpQ01853 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.33□□□□□ -0.44
VcpQ01853 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VcpQ01853 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VcpQ01853 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VcpQ01853 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
VcpQ01853 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VcpQ01853 Gm16071-201ENSMUST00000119589 793 ntBASIC12.33□□□□□ -0.44
VcpQ01853 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.33□□□□□ -0.44
VcpQ01853 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VcpQ01853 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.33□□□□□ -0.44
VcpQ01853 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.33□□□□□ -0.44
VcpQ01853 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
VcpQ01853 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VcpQ01853 Gm17826-201ENSMUST00000189720 798 ntBASIC12.33□□□□□ -0.44
VcpQ01853 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.33□□□□□ -0.44
VcpQ01853 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.33□□□□□ -0.44
VcpQ01853 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VcpQ01853 Gm45856-201ENSMUST00000212752 416 ntBASIC12.33□□□□□ -0.44
VcpQ01853 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VcpQ01853 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
VcpQ01853 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VcpQ01853 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.33□□□□□ -0.44
VcpQ01853 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.33□□□□□ -0.44
VcpQ01853 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.33□□□□□ -0.44
VcpQ01853 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VcpQ01853 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.33□□□□□ -0.44
VcpQ01853 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
VcpQ01853 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VcpQ01853 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VcpQ01853 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
VcpQ01853 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.33□□□□□ -0.44
VcpQ01853 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VcpQ01853 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
VcpQ01853 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VcpQ01853 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms