Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Xrn1P97789 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Xrn1P97789 Gm12009-201ENSMUST00000121361 1100 ntBASIC16.02■□□□□ 0.16
Xrn1P97789 Gm24140-201ENSMUST00000122773 326 ntBASIC16.02■□□□□ 0.16
Xrn1P97789 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Xrn1P97789 Gm43667-201ENSMUST00000198616 1095 ntBASIC16.02■□□□□ 0.16
Xrn1P97789 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Xrn1P97789 AC134537.1-201ENSMUST00000219205 265 ntBASIC16.02■□□□□ 0.16
Xrn1P97789 AC154461.3-201ENSMUST00000224831 573 ntBASIC16.02■□□□□ 0.16
Xrn1P97789 CT009713.2-201ENSMUST00000225532 1149 ntBASIC16.02■□□□□ 0.16
Xrn1P97789 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Xrn1P97789 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Xrn1P97789 Gm6560-201ENSMUST00000198588 1591 ntBASIC16.02■□□□□ 0.16
Xrn1P97789 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Xrn1P97789 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Xrn1P97789 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Xrn1P97789 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Xrn1P97789 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Xrn1P97789 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Xrn1P97789 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Xrn1P97789 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Xrn1P97789 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Xrn1P97789 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Xrn1P97789 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Xrn1P97789 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC16.02■□□□□ 0.15
Xrn1P97789 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Xrn1P97789 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Xrn1P97789 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Xrn1P97789 Gm8226-201ENSMUST00000190511 798 ntBASIC16.02■□□□□ 0.15
Xrn1P97789 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Xrn1P97789 AC124613.1-201ENSMUST00000198711 88 ntBASIC16.02■□□□□ 0.15
Xrn1P97789 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Xrn1P97789 AC133517.1-201ENSMUST00000225825 594 ntBASIC16.02■□□□□ 0.15
Xrn1P97789 AC154477.1-201ENSMUST00000226515 773 ntBASIC16.02■□□□□ 0.15
Xrn1P97789 AC137842.2-201ENSMUST00000227734 797 ntBASIC16.02■□□□□ 0.15
Xrn1P97789 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Xrn1P97789 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Xrn1P97789 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrn1P97789 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrn1P97789 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrn1P97789 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrn1P97789 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrn1P97789 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Xrn1P97789 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrn1P97789 AC153524.2-202ENSMUST00000220401 1794 ntBASIC16.01■□□□□ 0.15
Xrn1P97789 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Xrn1P97789 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrn1P97789 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrn1P97789 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrn1P97789 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrn1P97789 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Xrn1P97789 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Xrn1P97789 Gm14006-201ENSMUST00000122132 981 ntBASIC16.01■□□□□ 0.15
Xrn1P97789 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrn1P97789 Gm45090-201ENSMUST00000208775 1148 ntBASIC16.01■□□□□ 0.15
Xrn1P97789 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Xrn1P97789 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrn1P97789 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrn1P97789 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrn1P97789 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrn1P97789 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Xrn1P97789 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Xrn1P97789 Gm8684-201ENSMUST00000195078 1564 ntBASIC16.01■□□□□ 0.15
Xrn1P97789 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.01■□□□□ 0.15
Xrn1P97789 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Xrn1P97789 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC16■□□□□ 0.15
Xrn1P97789 Gm10305-201ENSMUST00000195331 2475 ntBASIC16■□□□□ 0.15
Xrn1P97789 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Xrn1P97789 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Xrn1P97789 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Xrn1P97789 Gm14176-201ENSMUST00000121302 477 ntBASIC16■□□□□ 0.15
Xrn1P97789 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC16■□□□□ 0.15
Xrn1P97789 Gm16441-201ENSMUST00000138176 924 ntBASIC16■□□□□ 0.15
Xrn1P97789 Gm6038-201ENSMUST00000154310 948 ntBASIC16■□□□□ 0.15
Xrn1P97789 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Xrn1P97789 Gm17944-201ENSMUST00000186351 643 ntBASIC16■□□□□ 0.15
Xrn1P97789 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC16■□□□□ 0.15
Xrn1P97789 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC16■□□□□ 0.15
Xrn1P97789 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC16■□□□□ 0.15
Xrn1P97789 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC16■□□□□ 0.15
Xrn1P97789 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Xrn1P97789 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Xrn1P97789 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Xrn1P97789 Gm18806-201ENSMUST00000207607 1775 ntBASIC16■□□□□ 0.15
Xrn1P97789 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Xrn1P97789 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Xrn1P97789 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Xrn1P97789 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Xrn1P97789 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC16■□□□□ 0.15
Xrn1P97789 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Xrn1P97789 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Xrn1P97789 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC16■□□□□ 0.15
Xrn1P97789 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Xrn1P97789 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Xrn1P97789 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Xrn1P97789 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC16■□□□□ 0.15
Xrn1P97789 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC16■□□□□ 0.15
Xrn1P97789 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Xrn1P97789 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC16■□□□□ 0.15
Xrn1P97789 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms