Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcc1P97496 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcc1P97496 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.43□□□□□ -0.1
Smarcc1P97496 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Smarcc1P97496 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.43□□□□□ -0.1
Smarcc1P97496 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcc1P97496 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcc1P97496 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Smarcc1P97496 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcc1P97496 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.43□□□□□ -0.1
Smarcc1P97496 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcc1P97496 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcc1P97496 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.42□□□□□ -0.1
Smarcc1P97496 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcc1P97496 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcc1P97496 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcc1P97496 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcc1P97496 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcc1P97496 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcc1P97496 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.42□□□□□ -0.1
Smarcc1P97496 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC14.42□□□□□ -0.1
Smarcc1P97496 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcc1P97496 Gm23612-201ENSMUST00000103823 110 ntBASIC14.42□□□□□ -0.1
Smarcc1P97496 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcc1P97496 Gm6158-201ENSMUST00000109467 904 ntBASIC14.42□□□□□ -0.1
Smarcc1P97496 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC14.42□□□□□ -0.1
Smarcc1P97496 Gm12389-201ENSMUST00000117696 418 ntBASIC14.42□□□□□ -0.1
Smarcc1P97496 Gm8302-201ENSMUST00000119217 852 ntBASIC14.42□□□□□ -0.1
Smarcc1P97496 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
Smarcc1P97496 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC14.42□□□□□ -0.1
Smarcc1P97496 Gm23576-201ENSMUST00000179918 110 ntBASIC14.42□□□□□ -0.1
Smarcc1P97496 Gm42660-201ENSMUST00000197733 947 ntBASIC14.42□□□□□ -0.1
Smarcc1P97496 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC14.42□□□□□ -0.1
Smarcc1P97496 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcc1P97496 AC162932.1-201ENSMUST00000219209 872 ntBASIC14.42□□□□□ -0.1
Smarcc1P97496 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC14.42□□□□□ -0.1
Smarcc1P97496 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.42□□□□□ -0.1
Smarcc1P97496 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcc1P97496 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcc1P97496 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcc1P97496 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcc1P97496 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcc1P97496 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Smarcc1P97496 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcc1P97496 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Smarcc1P97496 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcc1P97496 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcc1P97496 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.41□□□□□ -0.1
Smarcc1P97496 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcc1P97496 Gm44190-201ENSMUST00000205083 1401 ntBASIC14.41□□□□□ -0.1
Smarcc1P97496 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Smarcc1P97496 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Smarcc1P97496 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcc1P97496 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcc1P97496 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.41□□□□□ -0.1
Smarcc1P97496 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcc1P97496 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Smarcc1P97496 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcc1P97496 Gm26272-201ENSMUST00000179241 132 ntBASIC14.41□□□□□ -0.1
Smarcc1P97496 Mir7035-201ENSMUST00000184713 82 ntBASIC14.41□□□□□ -0.1
Smarcc1P97496 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcc1P97496 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.41□□□□□ -0.1
Smarcc1P97496 Gm43249-201ENSMUST00000200464 458 ntBASIC14.41□□□□□ -0.1
Smarcc1P97496 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcc1P97496 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcc1P97496 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcc1P97496 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcc1P97496 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcc1P97496 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcc1P97496 Gm6024-201ENSMUST00000117850 1558 ntBASIC14.41□□□□□ -0.1
Smarcc1P97496 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Smarcc1P97496 Gm5740-201ENSMUST00000211003 1857 ntBASIC14.41□□□□□ -0.1
Smarcc1P97496 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcc1P97496 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcc1P97496 Paupar-201ENSMUST00000194826 3482 ntBASIC14.41□□□□□ -0.1
Smarcc1P97496 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcc1P97496 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcc1P97496 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcc1P97496 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smarcc1P97496 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Smarcc1P97496 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.4□□□□□ -0.1
Smarcc1P97496 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.4□□□□□ -0.1
Smarcc1P97496 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Smarcc1P97496 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Smarcc1P97496 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Smarcc1P97496 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 Gm38344-201ENSMUST00000195306 1353 ntBASIC14.4□□□□□ -0.1
Smarcc1P97496 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smarcc1P97496 Gm25562-201ENSMUST00000104608 133 ntBASIC14.4□□□□□ -0.1
Smarcc1P97496 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms