Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm43334-201ENSMUST00000197740 1318 ntBASIC10.68□□□□□ -0.7
Cacna1aP97445 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cacna1aP97445 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cacna1aP97445 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.68□□□□□ -0.7
Cacna1aP97445 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Cacna1aP97445 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cacna1aP97445 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cacna1aP97445 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Cacna1aP97445 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cacna1aP97445 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cacna1aP97445 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cacna1aP97445 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Cacna1aP97445 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cacna1aP97445 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cacna1aP97445 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cacna1aP97445 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cacna1aP97445 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Cacna1aP97445 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.68□□□□□ -0.7
Cacna1aP97445 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cacna1aP97445 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.68□□□□□ -0.7
Cacna1aP97445 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cacna1aP97445 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cacna1aP97445 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cacna1aP97445 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cacna1aP97445 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cacna1aP97445 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cacna1aP97445 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cacna1aP97445 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cacna1aP97445 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cacna1aP97445 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cacna1aP97445 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Cacna1aP97445 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.67□□□□□ -0.7
Cacna1aP97445 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm5210-201ENSMUST00000182150 1010 ntBASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm26976-201ENSMUST00000182929 908 ntBASIC10.67□□□□□ -0.7
Cacna1aP97445 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC10.67□□□□□ -0.7
Cacna1aP97445 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC10.67□□□□□ -0.7
Cacna1aP97445 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm28937-201ENSMUST00000185413 695 ntBASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm29400-201ENSMUST00000187208 695 ntBASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm28662-201ENSMUST00000188446 695 ntBASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm28251-201ENSMUST00000188835 695 ntBASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm37318-201ENSMUST00000194325 695 ntBASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm38017-201ENSMUST00000194768 695 ntBASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm37287-201ENSMUST00000195449 695 ntBASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm37793-201ENSMUST00000195548 695 ntBASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm45094-201ENSMUST00000207013 617 ntBASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm44814-201ENSMUST00000207018 434 ntBASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm7082-201ENSMUST00000209880 969 ntBASIC10.67□□□□□ -0.7
Cacna1aP97445 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.67□□□□□ -0.7
Cacna1aP97445 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cacna1aP97445 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.67□□□□□ -0.7
Cacna1aP97445 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Cacna1aP97445 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Cacna1aP97445 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC10.67□□□□□ -0.7
Cacna1aP97445 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm17944-201ENSMUST00000186351 643 ntBASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm42430-201ENSMUST00000197209 616 ntBASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm30946-201ENSMUST00000198288 724 ntBASIC10.67□□□□□ -0.7
Cacna1aP97445 Gm43726-201ENSMUST00000199110 775 ntBASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms