Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm6855-201ENSMUST00000206307 790 ntBASIC14.42□□□□□ -0.1
Nkx2-3P97334 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC14.42□□□□□ -0.1
Nkx2-3P97334 CT010480.2-201ENSMUST00000225424 737 ntBASIC14.42□□□□□ -0.1
Nkx2-3P97334 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC14.42□□□□□ -0.1
Nkx2-3P97334 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Gm45416-201ENSMUST00000209713 2201 ntBASIC14.42□□□□□ -0.1
Nkx2-3P97334 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-3P97334 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Gm15620-201ENSMUST00000122949 270 ntBASIC14.41□□□□□ -0.1
Nkx2-3P97334 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-3P97334 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-3P97334 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Gm9353-201ENSMUST00000200472 604 ntBASIC14.41□□□□□ -0.1
Nkx2-3P97334 Gm6423-201ENSMUST00000204315 934 ntBASIC14.41□□□□□ -0.1
Nkx2-3P97334 Gm45085-201ENSMUST00000209100 441 ntBASIC14.41□□□□□ -0.1
Nkx2-3P97334 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-3P97334 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Gm10254-201ENSMUST00000052888 867 ntBASIC14.41□□□□□ -0.1
Nkx2-3P97334 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-3P97334 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.41□□□□□ -0.1
Nkx2-3P97334 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-3P97334 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Gm14274-201ENSMUST00000117182 615 ntBASIC14.4□□□□□ -0.1
Nkx2-3P97334 Gm11957-201ENSMUST00000118304 779 ntBASIC14.4□□□□□ -0.1
Nkx2-3P97334 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Gm17214-201ENSMUST00000164501 541 ntBASIC14.4□□□□□ -0.1
Nkx2-3P97334 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Gm20781-201ENSMUST00000193154 693 ntBASIC14.4□□□□□ -0.1
Nkx2-3P97334 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Gm21736-201ENSMUST00000195399 693 ntBASIC14.4□□□□□ -0.1
Nkx2-3P97334 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC14.4□□□□□ -0.1
Nkx2-3P97334 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-3P97334 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Gm18210-201ENSMUST00000209001 1524 ntBASIC14.4□□□□□ -0.1
Nkx2-3P97334 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-3P97334 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkx2-3P97334 AC124397.2-201ENSMUST00000225575 2215 ntBASIC14.39□□□□□ -0.11
Nkx2-3P97334 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nkx2-3P97334 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkx2-3P97334 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms