Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43bP86448 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim43bP86448 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.89□□□□□ -0.51
Trim43bP86448 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trim43bP86448 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43bP86448 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43bP86448 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43bP86448 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43bP86448 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43bP86448 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43bP86448 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43bP86448 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trim43bP86448 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.88□□□□□ -0.51
Trim43bP86448 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trim43bP86448 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.88□□□□□ -0.51
Trim43bP86448 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trim43bP86448 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trim43bP86448 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim43bP86448 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.88□□□□□ -0.51
Trim43bP86448 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.88□□□□□ -0.51
Trim43bP86448 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.88□□□□□ -0.51
Trim43bP86448 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.88□□□□□ -0.51
Trim43bP86448 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trim43bP86448 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim43bP86448 Mir7070-201ENSMUST00000183657 86 ntBASIC11.88□□□□□ -0.51
Trim43bP86448 Gm44262-201ENSMUST00000204969 372 ntBASIC11.88□□□□□ -0.51
Trim43bP86448 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.88□□□□□ -0.51
Trim43bP86448 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trim43bP86448 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim43bP86448 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
Trim43bP86448 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim43bP86448 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Trim43bP86448 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim43bP86448 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trim43bP86448 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trim43bP86448 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43bP86448 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.87□□□□□ -0.51
Trim43bP86448 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
Trim43bP86448 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trim43bP86448 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43bP86448 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43bP86448 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43bP86448 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.87□□□□□ -0.51
Trim43bP86448 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43bP86448 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43bP86448 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43bP86448 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43bP86448 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43bP86448 Gm11989-201ENSMUST00000117240 672 ntBASIC11.87□□□□□ -0.51
Trim43bP86448 Gm11362-201ENSMUST00000118838 850 ntBASIC11.87□□□□□ -0.51
Trim43bP86448 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.87□□□□□ -0.51
Trim43bP86448 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim43bP86448 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43bP86448 Mir3102-201ENSMUST00000175555 104 ntBASIC11.87□□□□□ -0.51
Trim43bP86448 Gm27341-201ENSMUST00000183570 106 ntBASIC11.87□□□□□ -0.51
Trim43bP86448 Gm18827-201ENSMUST00000188341 790 ntBASIC11.87□□□□□ -0.51
Trim43bP86448 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43bP86448 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43bP86448 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim43bP86448 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43bP86448 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.87□□□□□ -0.51
Trim43bP86448 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trim43bP86448 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trim43bP86448 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43bP86448 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trim43bP86448 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43bP86448 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43bP86448 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43bP86448 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43bP86448 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Trim43bP86448 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim43bP86448 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43bP86448 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim43bP86448 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim43bP86448 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms