Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Pdlim4P70271 Gm14058-201ENSMUST00000116082 735 ntBASIC9.63□□□□□ -0.87
Pdlim4P70271 Gm11700-201ENSMUST00000119409 403 ntBASIC9.63□□□□□ -0.87
Pdlim4P70271 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC9.63□□□□□ -0.87
Pdlim4P70271 Gm8566-201ENSMUST00000120174 465 ntBASIC9.63□□□□□ -0.87
Pdlim4P70271 Gm11450-201ENSMUST00000121144 333 ntBASIC9.63□□□□□ -0.87
Pdlim4P70271 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC9.63□□□□□ -0.87
Pdlim4P70271 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Gm26047-201ENSMUST00000157308 113 ntBASIC9.63□□□□□ -0.87
Pdlim4P70271 Gm8815-201ENSMUST00000173809 620 ntBASIC9.63□□□□□ -0.87
Pdlim4P70271 Gm4310-201ENSMUST00000177847 889 ntBASIC9.63□□□□□ -0.87
Pdlim4P70271 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC9.63□□□□□ -0.87
Pdlim4P70271 Gm9192-201ENSMUST00000183221 985 ntBASIC9.63□□□□□ -0.87
Pdlim4P70271 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC9.63□□□□□ -0.87
Pdlim4P70271 Gm26047-202ENSMUST00000198840 115 ntBASIC9.63□□□□□ -0.87
Pdlim4P70271 Gm4482-201ENSMUST00000200876 742 ntBASIC9.63□□□□□ -0.87
Pdlim4P70271 Gm6450-201ENSMUST00000200896 574 ntBASIC9.63□□□□□ -0.87
Pdlim4P70271 Gm44136-201ENSMUST00000203819 1106 ntBASIC9.63□□□□□ -0.87
Pdlim4P70271 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Gm45575-201ENSMUST00000210283 548 ntBASIC9.63□□□□□ -0.87
Pdlim4P70271 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
Pdlim4P70271 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Pdlim4P70271 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Pdlim4P70271 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.63□□□□□ -0.87
Pdlim4P70271 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.63□□□□□ -0.87
Pdlim4P70271 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Pdlim4P70271 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Pdlim4P70271 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Pdlim4P70271 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Gm38292-201ENSMUST00000192646 3045 ntBASIC9.62□□□□□ -0.87
Pdlim4P70271 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Pdlim4P70271 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC9.62□□□□□ -0.87
Pdlim4P70271 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.62□□□□□ -0.87
Pdlim4P70271 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Pdlim4P70271 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.62□□□□□ -0.87
Pdlim4P70271 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Pdlim4P70271 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC9.62□□□□□ -0.87
Pdlim4P70271 Gm13035-201ENSMUST00000117496 342 ntBASIC9.62□□□□□ -0.87
Pdlim4P70271 Gm15515-201ENSMUST00000117827 822 ntBASIC9.62□□□□□ -0.87
Pdlim4P70271 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC9.62□□□□□ -0.87
Pdlim4P70271 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.62□□□□□ -0.87
Pdlim4P70271 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC9.62□□□□□ -0.87
Pdlim4P70271 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC9.62□□□□□ -0.87
Pdlim4P70271 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
Pdlim4P70271 Ighv1-48-201ENSMUST00000191795 294 ntBASIC9.62□□□□□ -0.87
Pdlim4P70271 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC9.62□□□□□ -0.87
Pdlim4P70271 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Gm6905-201ENSMUST00000205729 511 ntBASIC9.62□□□□□ -0.87
Pdlim4P70271 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC9.62□□□□□ -0.87
Pdlim4P70271 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.62□□□□□ -0.87
Pdlim4P70271 AC151275.1-201ENSMUST00000224870 585 ntBASIC9.62□□□□□ -0.87
Pdlim4P70271 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Pdlim4P70271 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Pdlim4P70271 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Pdlim4P70271 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms