Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl39P62892 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
Rpl39P62892 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl39P62892 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl39P62892 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Rpl39P62892 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl39P62892 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC8.18□□□□□ -1.1
Rpl39P62892 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl39P62892 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rpl39P62892 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Rpl39P62892 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC8.17□□□□□ -1.1
Rpl39P62892 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Rpl39P62892 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Rpl39P62892 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Rpl39P62892 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC8.17□□□□□ -1.1
Rpl39P62892 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Rpl39P62892 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC8.17□□□□□ -1.1
Rpl39P62892 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC8.17□□□□□ -1.1
Rpl39P62892 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC8.17□□□□□ -1.1
Rpl39P62892 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
Rpl39P62892 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC8.17□□□□□ -1.1
Rpl39P62892 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC8.17□□□□□ -1.1
Rpl39P62892 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Rpl39P62892 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Rpl39P62892 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC8.17□□□□□ -1.1
Rpl39P62892 Gm38230-201ENSMUST00000193572 1159 ntBASIC8.17□□□□□ -1.1
Rpl39P62892 Gm19963-201ENSMUST00000208413 1255 ntBASIC8.17□□□□□ -1.1
Rpl39P62892 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Gm9004-201ENSMUST00000218739 1222 ntBASIC8.17□□□□□ -1.1
Rpl39P62892 AC154252.2-201ENSMUST00000223593 767 ntBASIC8.17□□□□□ -1.1
Rpl39P62892 Wdyhv1-206ENSMUST00000227142 786 ntBASIC8.17□□□□□ -1.1
Rpl39P62892 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Rpl39P62892 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Rpl39P62892 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Rpl39P62892 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Rpl39P62892 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC8.17□□□□□ -1.1
Rpl39P62892 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC8.17□□□□□ -1.1
Rpl39P62892 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC8.17□□□□□ -1.1
Rpl39P62892 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Rpl39P62892 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Rpl39P62892 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rpl39P62892 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC8.17□□□□□ -1.1
Rpl39P62892 AC122273.1-201ENSMUST00000213634 2327 ntBASIC8.17□□□□□ -1.1
Rpl39P62892 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Rpl39P62892 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Rpl39P62892 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Rpl39P62892 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Gm10434-201ENSMUST00000101158 471 ntBASIC8.16□□□□□ -1.1
Rpl39P62892 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Rpl39P62892 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Rpl39P62892 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Rpl39P62892 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Rpl39P62892 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Gm6023-201ENSMUST00000118217 606 ntBASIC8.16□□□□□ -1.1
Rpl39P62892 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Rpl39P62892 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC8.16□□□□□ -1.1
Rpl39P62892 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC8.16□□□□□ -1.1
Rpl39P62892 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Rpl39P62892 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms