Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.29□□□□□ -0.92
Sssca1P56873 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.29□□□□□ -0.92
Sssca1P56873 Gm17244-201ENSMUST00000192482 3416 ntBASIC9.29□□□□□ -0.92
Sssca1P56873 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Sssca1P56873 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC9.29□□□□□ -0.92
Sssca1P56873 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Sssca1P56873 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Sssca1P56873 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Sssca1P56873 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Sssca1P56873 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
Sssca1P56873 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC9.28□□□□□ -0.92
Sssca1P56873 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Sssca1P56873 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Gm9466-201ENSMUST00000218144 2246 ntBASIC9.28□□□□□ -0.92
Sssca1P56873 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.28□□□□□ -0.92
Sssca1P56873 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Sssca1P56873 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Gm23931-201ENSMUST00000103842 109 ntBASIC9.28□□□□□ -0.92
Sssca1P56873 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Sssca1P56873 Gm15004-201ENSMUST00000119192 630 ntBASIC9.28□□□□□ -0.92
Sssca1P56873 Gm11793-201ENSMUST00000120433 981 ntBASIC9.28□□□□□ -0.92
Sssca1P56873 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC9.28□□□□□ -0.92
Sssca1P56873 Gm13786-201ENSMUST00000122371 333 ntBASIC9.28□□□□□ -0.92
Sssca1P56873 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC9.28□□□□□ -0.92
Sssca1P56873 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Sssca1P56873 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC9.28□□□□□ -0.92
Sssca1P56873 Gm5070-201ENSMUST00000177599 862 ntBASIC9.28□□□□□ -0.92
Sssca1P56873 Gm29396-201ENSMUST00000185659 716 ntBASIC9.28□□□□□ -0.92
Sssca1P56873 Rps4l-202ENSMUST00000204242 789 ntBASIC9.28□□□□□ -0.92
Sssca1P56873 Gm30285-201ENSMUST00000214614 422 ntBASIC9.28□□□□□ -0.92
Sssca1P56873 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Gm5455-201ENSMUST00000058710 715 ntBASIC9.28□□□□□ -0.92
Sssca1P56873 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Sssca1P56873 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 AC171277.1-201ENSMUST00000216902 1441 ntBASIC9.28□□□□□ -0.92
Sssca1P56873 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9.28□□□□□ -0.92
Sssca1P56873 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Gm38292-201ENSMUST00000192646 3045 ntBASIC9.28□□□□□ -0.92
Sssca1P56873 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC9.28□□□□□ -0.92
Sssca1P56873 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Sssca1P56873 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
Sssca1P56873 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Sssca1P56873 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Sssca1P56873 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Sssca1P56873 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Sssca1P56873 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Sssca1P56873 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Sssca1P56873 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Sssca1P56873 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Sssca1P56873 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC9.27□□□□□ -0.92
Sssca1P56873 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Sssca1P56873 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.27□□□□□ -0.92
Sssca1P56873 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
Sssca1P56873 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC9.27□□□□□ -0.93
Sssca1P56873 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC9.27□□□□□ -0.93
Sssca1P56873 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sssca1P56873 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms