Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.34□□□□□ -0.59
Sox18P43680 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox18P43680 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.33□□□□□ -0.59
Sox18P43680 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Sox18P43680 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.33□□□□□ -0.6
Sox18P43680 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Sox18P43680 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Gm5641-201ENSMUST00000091130 1488 ntBASIC11.33□□□□□ -0.6
Sox18P43680 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.33□□□□□ -0.6
Sox18P43680 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Gm13019-201ENSMUST00000120000 276 ntBASIC11.33□□□□□ -0.6
Sox18P43680 Gm10169-201ENSMUST00000121822 348 ntBASIC11.33□□□□□ -0.6
Sox18P43680 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sox18P43680 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sox18P43680 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sox18P43680 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Sox18P43680 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Sox18P43680 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Sox18P43680 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Sox18P43680 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sox18P43680 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Sox18P43680 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Sox18P43680 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sox18P43680 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Gm28064-201ENSMUST00000185639 858 ntBASIC11.33□□□□□ -0.6
Sox18P43680 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC11.33□□□□□ -0.6
Sox18P43680 Gm28926-201ENSMUST00000191063 680 ntBASIC11.33□□□□□ -0.6
Sox18P43680 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC11.33□□□□□ -0.6
Sox18P43680 Gm19030-201ENSMUST00000194947 552 ntBASIC11.33□□□□□ -0.6
Sox18P43680 Gm42836-201ENSMUST00000197198 728 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox18P43680 Gm42430-201ENSMUST00000197209 616 ntBASIC11.33□□□□□ -0.6
Sox18P43680 Gm18711-201ENSMUST00000199341 750 ntBASIC11.33□□□□□ -0.6
Sox18P43680 Gm43531-201ENSMUST00000200676 1114 ntBASIC11.33□□□□□ -0.6
Sox18P43680 Gm6590-201ENSMUST00000203343 687 ntBASIC11.33□□□□□ -0.6
Sox18P43680 Gm29763-201ENSMUST00000205306 616 ntBASIC11.33□□□□□ -0.6
Sox18P43680 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox18P43680 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Sox18P43680 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.33□□□□□ -0.6
Sox18P43680 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox18P43680 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox18P43680 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC11.33□□□□□ -0.6
Sox18P43680 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.33□□□□□ -0.6
Sox18P43680 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sox18P43680 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Gm26035-201ENSMUST00000083065 308 ntBASIC11.33□□□□□ -0.6
Sox18P43680 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Sox18P43680 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.33□□□□□ -0.6
Sox18P43680 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Sox18P43680 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Sox18P43680 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox18P43680 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Sox18P43680 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sox18P43680 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sox18P43680 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox18P43680 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox18P43680 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox18P43680 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.32□□□□□ -0.6
Sox18P43680 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox18P43680 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox18P43680 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.32□□□□□ -0.6
Sox18P43680 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sox18P43680 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
Sox18P43680 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox18P43680 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox18P43680 Gm11502-201ENSMUST00000120917 1211 ntBASIC11.32□□□□□ -0.6
Sox18P43680 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Sox18P43680 Gm17214-201ENSMUST00000164501 541 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms