Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC14.88□□□□□ -0.03
Col18a1P39061 Gm17147-201ENSMUST00000164176 432 ntBASIC14.88□□□□□ -0.03
Col18a1P39061 Gm43097-201ENSMUST00000196867 151 ntBASIC14.88□□□□□ -0.03
Col18a1P39061 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col18a1P39061 Gm43002-201ENSMUST00000200310 155 ntBASIC14.88□□□□□ -0.03
Col18a1P39061 Gm42803-201ENSMUST00000201051 451 ntBASIC14.88□□□□□ -0.03
Col18a1P39061 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col18a1P39061 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col18a1P39061 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col18a1P39061 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC14.88□□□□□ -0.03
Col18a1P39061 AC155300.1-201ENSMUST00000219134 480 ntBASIC14.88□□□□□ -0.03
Col18a1P39061 Gm5194-201ENSMUST00000221457 742 ntBASIC14.88□□□□□ -0.03
Col18a1P39061 Gm8615-201ENSMUST00000025307 771 ntBASIC14.88□□□□□ -0.03
Col18a1P39061 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col18a1P39061 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col18a1P39061 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col18a1P39061 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col18a1P39061 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col18a1P39061 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Col18a1P39061 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Col18a1P39061 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col18a1P39061 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.87□□□□□ -0.03
Col18a1P39061 Gm5766-201ENSMUST00000160520 1977 ntBASIC14.87□□□□□ -0.03
Col18a1P39061 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Col18a1P39061 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Col18a1P39061 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col18a1P39061 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Col18a1P39061 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col18a1P39061 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col18a1P39061 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col18a1P39061 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Col18a1P39061 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Col18a1P39061 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC14.87□□□□□ -0.03
Col18a1P39061 Gm28391-201ENSMUST00000185202 379 ntBASIC14.87□□□□□ -0.03
Col18a1P39061 Gm29528-201ENSMUST00000186699 379 ntBASIC14.87□□□□□ -0.03
Col18a1P39061 Gm29526-201ENSMUST00000187217 379 ntBASIC14.87□□□□□ -0.03
Col18a1P39061 Gm19058-201ENSMUST00000192135 598 ntBASIC14.87□□□□□ -0.03
Col18a1P39061 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC14.87□□□□□ -0.03
Col18a1P39061 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC14.87□□□□□ -0.03
Col18a1P39061 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC14.87□□□□□ -0.03
Col18a1P39061 AC174647.1-201ENSMUST00000227419 1271 ntBASIC14.87□□□□□ -0.03
Col18a1P39061 AC164883.7-201ENSMUST00000228534 851 ntBASIC14.87□□□□□ -0.03
Col18a1P39061 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.87□□□□□ -0.03
Col18a1P39061 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col18a1P39061 Gm15599-201ENSMUST00000122283 1345 ntBASIC14.87□□□□□ -0.03
Col18a1P39061 Gm42651-201ENSMUST00000199851 1339 ntBASIC14.87□□□□□ -0.03
Col18a1P39061 Gm3836-201ENSMUST00000211377 1613 ntBASIC14.87□□□□□ -0.03
Col18a1P39061 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col18a1P39061 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.87□□□□□ -0.03
Col18a1P39061 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col18a1P39061 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col18a1P39061 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col18a1P39061 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col18a1P39061 Gm6713-201ENSMUST00000216137 1446 ntBASIC14.87□□□□□ -0.03
Col18a1P39061 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col18a1P39061 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC14.86□□□□□ -0.03
Col18a1P39061 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.86□□□□□ -0.03
Col18a1P39061 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Col18a1P39061 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col18a1P39061 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col18a1P39061 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col18a1P39061 Gm15702-201ENSMUST00000119680 444 ntBASIC14.86□□□□□ -0.03
Col18a1P39061 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC14.86□□□□□ -0.03
Col18a1P39061 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC14.86□□□□□ -0.03
Col18a1P39061 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC14.86□□□□□ -0.03
Col18a1P39061 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col18a1P39061 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col18a1P39061 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC14.86□□□□□ -0.03
Col18a1P39061 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Col18a1P39061 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Col18a1P39061 Gm9864-201ENSMUST00000090043 1656 ntBASIC14.86□□□□□ -0.03
Col18a1P39061 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col18a1P39061 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col18a1P39061 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col18a1P39061 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col18a1P39061 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col18a1P39061 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col18a1P39061 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col18a1P39061 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col18a1P39061 Gm24066-201ENSMUST00000104515 131 ntBASIC14.85□□□□□ -0.03
Col18a1P39061 Gm13372-201ENSMUST00000123129 688 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col18a1P39061 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC14.85□□□□□ -0.03
Col18a1P39061 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col18a1P39061 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC14.85□□□□□ -0.03
Col18a1P39061 Gm5501-201ENSMUST00000165917 832 ntBASIC14.85□□□□□ -0.03
Col18a1P39061 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC14.85□□□□□ -0.03
Col18a1P39061 Gm5845-201ENSMUST00000195812 796 ntBASIC14.85□□□□□ -0.03
Col18a1P39061 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC14.85□□□□□ -0.03
Col18a1P39061 Gm9273-201ENSMUST00000200606 715 ntBASIC14.85□□□□□ -0.03
Col18a1P39061 Gm2716-201ENSMUST00000212350 643 ntBASIC14.85□□□□□ -0.03
Col18a1P39061 Gm18042-201ENSMUST00000219887 790 ntBASIC14.85□□□□□ -0.03
Col18a1P39061 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Col18a1P39061 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col18a1P39061 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col18a1P39061 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Col18a1P39061 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col18a1P39061 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Col18a1P39061 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Col18a1P39061 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Col18a1P39061 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms