Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
Cdh4P39038 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Gm9540-201ENSMUST00000188230 478 ntBASIC11.07□□□□□ -0.64
Cdh4P39038 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.07□□□□□ -0.64
Cdh4P39038 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.07□□□□□ -0.64
Cdh4P39038 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdh4P39038 Gm18065-201ENSMUST00000221395 526 ntBASIC11.07□□□□□ -0.64
Cdh4P39038 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.07□□□□□ -0.64
Cdh4P39038 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdh4P39038 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cdh4P39038 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cdh4P39038 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cdh4P39038 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cdh4P39038 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh4P39038 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdh4P39038 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.06□□□□□ -0.64
Cdh4P39038 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 Gm14193-201ENSMUST00000105067 153 ntBASIC11.06□□□□□ -0.64
Cdh4P39038 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.06□□□□□ -0.64
Cdh4P39038 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.06□□□□□ -0.64
Cdh4P39038 Gm10051-201ENSMUST00000145209 414 ntBASIC11.06□□□□□ -0.64
Cdh4P39038 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdh4P39038 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 Mir3102-201ENSMUST00000175555 104 ntBASIC11.06□□□□□ -0.64
Cdh4P39038 Gm10807-201ENSMUST00000177134 795 ntBASIC11.06□□□□□ -0.64
Cdh4P39038 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.06□□□□□ -0.64
Cdh4P39038 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cdh4P39038 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.06□□□□□ -0.64
Cdh4P39038 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdh4P39038 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.06□□□□□ -0.64
Cdh4P39038 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdh4P39038 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.06□□□□□ -0.64
Cdh4P39038 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Cdh4P39038 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.06□□□□□ -0.64
Cdh4P39038 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cdh4P39038 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh4P39038 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh4P39038 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh4P39038 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh4P39038 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh4P39038 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh4P39038 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh4P39038 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh4P39038 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Cdh4P39038 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh4P39038 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.05□□□□□ -0.64
Cdh4P39038 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh4P39038 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh4P39038 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh4P39038 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cdh4P39038 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Cdh4P39038 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cdh4P39038 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.05□□□□□ -0.64
Cdh4P39038 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh4P39038 Gm7666-201ENSMUST00000146631 819 ntBASIC11.05□□□□□ -0.64
Cdh4P39038 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.05□□□□□ -0.64
Cdh4P39038 Gm3150-201ENSMUST00000166418 204 ntBASIC11.05□□□□□ -0.64
Cdh4P39038 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh4P39038 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Cdh4P39038 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh4P39038 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.05□□□□□ -0.64
Cdh4P39038 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms