Protein–RNA interactions for Protein: P33215

Nedd1, Protein NEDD1, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1P33215 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.92□□□□□ -0.34
Nedd1P33215 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.92□□□□□ -0.34
Nedd1P33215 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd1P33215 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd1P33215 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nedd1P33215 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd1P33215 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nedd1P33215 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd1P33215 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nedd1P33215 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd1P33215 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nedd1P33215 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.92□□□□□ -0.34
Nedd1P33215 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd1P33215 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.92□□□□□ -0.34
Nedd1P33215 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd1P33215 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd1P33215 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.92□□□□□ -0.34
Nedd1P33215 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nedd1P33215 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nedd1P33215 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Nedd1P33215 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nedd1P33215 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.91□□□□□ -0.34
Nedd1P33215 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Nedd1P33215 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Nedd1P33215 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.91□□□□□ -0.34
Nedd1P33215 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nedd1P33215 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Nedd1P33215 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.91□□□□□ -0.34
Nedd1P33215 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Gm12899-201ENSMUST00000120565 551 ntBASIC12.91□□□□□ -0.34
Nedd1P33215 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nedd1P33215 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Nedd1P33215 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Gm24992-201ENSMUST00000157412 130 ntBASIC12.91□□□□□ -0.34
Nedd1P33215 Gm22846-201ENSMUST00000157706 270 ntBASIC12.91□□□□□ -0.34
Nedd1P33215 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.91□□□□□ -0.34
Nedd1P33215 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.91□□□□□ -0.34
Nedd1P33215 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.91□□□□□ -0.34
Nedd1P33215 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Gm42867-201ENSMUST00000202995 469 ntBASIC12.91□□□□□ -0.34
Nedd1P33215 Gm44158-201ENSMUST00000203881 505 ntBASIC12.91□□□□□ -0.34
Nedd1P33215 Gm44545-201ENSMUST00000208262 746 ntBASIC12.91□□□□□ -0.34
Nedd1P33215 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.91□□□□□ -0.34
Nedd1P33215 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.91□□□□□ -0.34
Nedd1P33215 Gm17872-201ENSMUST00000222550 532 ntBASIC12.91□□□□□ -0.34
Nedd1P33215 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.91□□□□□ -0.34
Nedd1P33215 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nedd1P33215 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.91□□□□□ -0.34
Nedd1P33215 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Nedd1P33215 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nedd1P33215 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.9□□□□□ -0.34
Nedd1P33215 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd1P33215 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Nedd1P33215 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd1P33215 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.9□□□□□ -0.34
Nedd1P33215 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.9□□□□□ -0.34
Nedd1P33215 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nedd1P33215 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Nedd1P33215 Gm25766-201ENSMUST00000104101 131 ntBASIC12.9□□□□□ -0.34
Nedd1P33215 Gm26013-201ENSMUST00000104404 119 ntBASIC12.9□□□□□ -0.34
Nedd1P33215 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
Nedd1P33215 Gm14665-201ENSMUST00000122294 557 ntBASIC12.9□□□□□ -0.34
Nedd1P33215 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd1P33215 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nedd1P33215 Mir7051-201ENSMUST00000184167 73 ntBASIC12.9□□□□□ -0.34
Nedd1P33215 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.9□□□□□ -0.34
Nedd1P33215 Gm8197-202ENSMUST00000193422 934 ntBASIC12.9□□□□□ -0.34
Nedd1P33215 Gm42657-201ENSMUST00000201746 211 ntBASIC12.9□□□□□ -0.34
Nedd1P33215 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.9□□□□□ -0.34
Nedd1P33215 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nedd1P33215 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.9□□□□□ -0.34
Nedd1P33215 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Nedd1P33215 Gm10263-201ENSMUST00000085163 300 ntBASIC12.9□□□□□ -0.34
Nedd1P33215 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms