Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Slc6a1P31648 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.93□□□□□ -0.82
Slc6a1P31648 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC9.93□□□□□ -0.82
Slc6a1P31648 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Slc6a1P31648 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.93□□□□□ -0.82
Slc6a1P31648 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Slc6a1P31648 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Slc6a1P31648 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Slc6a1P31648 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Slc6a1P31648 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Slc6a1P31648 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Slc6a1P31648 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Slc6a1P31648 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC9.93□□□□□ -0.82
Slc6a1P31648 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
Slc6a1P31648 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Slc6a1P31648 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Slc6a1P31648 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Gm18782-201ENSMUST00000209023 1399 ntBASIC9.92□□□□□ -0.82
Slc6a1P31648 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC9.92□□□□□ -0.82
Slc6a1P31648 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 AC153380.1-201ENSMUST00000214959 2364 ntBASIC9.92□□□□□ -0.82
Slc6a1P31648 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Slc6a1P31648 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Slc6a1P31648 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Slc6a1P31648 Gm12314-201ENSMUST00000118104 538 ntBASIC9.92□□□□□ -0.82
Slc6a1P31648 Gm4986-201ENSMUST00000119731 549 ntBASIC9.92□□□□□ -0.82
Slc6a1P31648 Gm13297-201ENSMUST00000120205 934 ntBASIC9.92□□□□□ -0.82
Slc6a1P31648 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC9.92□□□□□ -0.82
Slc6a1P31648 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.92□□□□□ -0.82
Slc6a1P31648 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC9.92□□□□□ -0.82
Slc6a1P31648 Gm7809-201ENSMUST00000153199 742 ntBASIC9.92□□□□□ -0.82
Slc6a1P31648 Gm3890-201ENSMUST00000182416 207 ntBASIC9.92□□□□□ -0.82
Slc6a1P31648 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Gm38314-201ENSMUST00000195709 625 ntBASIC9.92□□□□□ -0.82
Slc6a1P31648 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC9.92□□□□□ -0.82
Slc6a1P31648 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Slc6a1P31648 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC9.92□□□□□ -0.82
Slc6a1P31648 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC9.92□□□□□ -0.82
Slc6a1P31648 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC9.92□□□□□ -0.82
Slc6a1P31648 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Slc6a1P31648 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC9.92□□□□□ -0.82
Slc6a1P31648 Gm32025-201ENSMUST00000217960 307 ntBASIC9.92□□□□□ -0.82
Slc6a1P31648 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC9.92□□□□□ -0.82
Slc6a1P31648 AC069562.3-201ENSMUST00000225387 587 ntBASIC9.92□□□□□ -0.82
Slc6a1P31648 Dhrs4-202ENSMUST00000226168 828 ntBASIC9.92□□□□□ -0.82
Slc6a1P31648 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.92□□□□□ -0.82
Slc6a1P31648 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC9.92□□□□□ -0.82
Slc6a1P31648 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Slc6a1P31648 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Slc6a1P31648 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.92□□□□□ -0.82
Slc6a1P31648 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Slc6a1P31648 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.92□□□□□ -0.82
Slc6a1P31648 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Slc6a1P31648 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Slc6a1P31648 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
Slc6a1P31648 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Slc6a1P31648 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Slc6a1P31648 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Slc6a1P31648 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Slc6a1P31648 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Slc6a1P31648 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Slc6a1P31648 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms