Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 AC139382.1-201ENSMUST00000221402 498 ntBASIC10.57□□□□□ -0.72
Nedd8P29595 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nedd8P29595 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.57□□□□□ -0.72
Nedd8P29595 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nedd8P29595 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC10.57□□□□□ -0.72
Nedd8P29595 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nedd8P29595 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Nedd8P29595 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nedd8P29595 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nedd8P29595 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Nedd8P29595 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Nedd8P29595 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nedd8P29595 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Nedd8P29595 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nedd8P29595 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nedd8P29595 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Nedd8P29595 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nedd8P29595 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.57□□□□□ -0.72
Nedd8P29595 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Nedd8P29595 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Nedd8P29595 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Nedd8P29595 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Nedd8P29595 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Nedd8P29595 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Nedd8P29595 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.56□□□□□ -0.72
Nedd8P29595 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.56□□□□□ -0.72
Nedd8P29595 Gm16215-201ENSMUST00000161990 637 ntBASIC10.56□□□□□ -0.72
Nedd8P29595 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Nedd8P29595 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.56□□□□□ -0.72
Nedd8P29595 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.56□□□□□ -0.72
Nedd8P29595 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC10.56□□□□□ -0.72
Nedd8P29595 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.56□□□□□ -0.72
Nedd8P29595 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Nedd8P29595 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Nedd8P29595 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.55□□□□□ -0.72
Nedd8P29595 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nedd8P29595 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.55□□□□□ -0.72
Nedd8P29595 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Nedd8P29595 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nedd8P29595 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nedd8P29595 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nedd8P29595 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nedd8P29595 Gm14999-201ENSMUST00000121039 624 ntBASIC10.55□□□□□ -0.72
Nedd8P29595 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC10.55□□□□□ -0.72
Nedd8P29595 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nedd8P29595 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.55□□□□□ -0.72
Nedd8P29595 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nedd8P29595 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Nedd8P29595 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nedd8P29595 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.55□□□□□ -0.72
Nedd8P29595 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC10.55□□□□□ -0.72
Nedd8P29595 AC155252.1-201ENSMUST00000226462 1208 ntBASIC10.55□□□□□ -0.72
Nedd8P29595 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.55□□□□□ -0.72
Nedd8P29595 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nedd8P29595 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Nedd8P29595 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nedd8P29595 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nedd8P29595 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Nedd8P29595 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nedd8P29595 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nedd8P29595 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nedd8P29595 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nedd8P29595 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nedd8P29595 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nedd8P29595 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Nedd8P29595 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Nedd8P29595 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Nedd8P29595 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Nedd8P29595 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nedd8P29595 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC10.55□□□□□ -0.72
Nedd8P29595 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nedd8P29595 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Nedd8P29595 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Nedd8P29595 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms