Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.92□□□□□ -0.34
Col2a1P28481 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Col2a1P28481 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Col2a1P28481 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col2a1P28481 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col2a1P28481 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col2a1P28481 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col2a1P28481 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.92□□□□□ -0.34
Col2a1P28481 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Col2a1P28481 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col2a1P28481 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col2a1P28481 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Col2a1P28481 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col2a1P28481 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.92□□□□□ -0.34
Col2a1P28481 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col2a1P28481 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col2a1P28481 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col2a1P28481 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col2a1P28481 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.92□□□□□ -0.34
Col2a1P28481 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col2a1P28481 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Col2a1P28481 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.92□□□□□ -0.34
Col2a1P28481 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col2a1P28481 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col2a1P28481 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col2a1P28481 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.91□□□□□ -0.34
Col2a1P28481 Mir1893-201ENSMUST00000122565 83 ntBASIC12.91□□□□□ -0.34
Col2a1P28481 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.91□□□□□ -0.34
Col2a1P28481 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC12.91□□□□□ -0.34
Col2a1P28481 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.91□□□□□ -0.34
Col2a1P28481 Gm24328-201ENSMUST00000175104 67 ntBASIC12.91□□□□□ -0.34
Col2a1P28481 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.91□□□□□ -0.34
Col2a1P28481 Gm7719-201ENSMUST00000182374 975 ntBASIC12.91□□□□□ -0.34
Col2a1P28481 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Col2a1P28481 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col2a1P28481 Gm4903-201ENSMUST00000210462 405 ntBASIC12.91□□□□□ -0.34
Col2a1P28481 Saa-ps-201ENSMUST00000211148 320 ntBASIC12.91□□□□□ -0.34
Col2a1P28481 AC164429.1-201ENSMUST00000224210 518 ntBASIC12.91□□□□□ -0.34
Col2a1P28481 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.91□□□□□ -0.34
Col2a1P28481 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC12.91□□□□□ -0.34
Col2a1P28481 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Col2a1P28481 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Col2a1P28481 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Col2a1P28481 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.91□□□□□ -0.34
Col2a1P28481 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col2a1P28481 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col2a1P28481 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Gm14213-201ENSMUST00000119778 768 ntBASIC12.91□□□□□ -0.34
Col2a1P28481 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Col2a1P28481 Gm28032-201ENSMUST00000184104 96 ntBASIC12.91□□□□□ -0.34
Col2a1P28481 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC12.91□□□□□ -0.34
Col2a1P28481 Gm44647-201ENSMUST00000207402 428 ntBASIC12.91□□□□□ -0.34
Col2a1P28481 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col2a1P28481 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.91□□□□□ -0.34
Col2a1P28481 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col2a1P28481 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Col2a1P28481 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.9□□□□□ -0.34
Col2a1P28481 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Col2a1P28481 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.9□□□□□ -0.34
Col2a1P28481 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col2a1P28481 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms