Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.69□□□□□ -0.7
Cd40lgP27548 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Cd40lgP27548 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.69□□□□□ -0.7
Cd40lgP27548 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Cd40lgP27548 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.69□□□□□ -0.7
Cd40lgP27548 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC10.69□□□□□ -0.7
Cd40lgP27548 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.69□□□□□ -0.7
Cd40lgP27548 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Cd40lgP27548 Mir7070-201ENSMUST00000183657 86 ntBASIC10.69□□□□□ -0.7
Cd40lgP27548 AU022133-201ENSMUST00000200601 873 ntBASIC10.69□□□□□ -0.7
Cd40lgP27548 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Cd40lgP27548 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Cd40lgP27548 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Cd40lgP27548 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cd40lgP27548 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC10.68□□□□□ -0.7
Cd40lgP27548 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.68□□□□□ -0.7
Cd40lgP27548 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.68□□□□□ -0.7
Cd40lgP27548 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Cd40lgP27548 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Cd40lgP27548 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.68□□□□□ -0.7
Cd40lgP27548 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.68□□□□□ -0.7
Cd40lgP27548 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.68□□□□□ -0.7
Cd40lgP27548 Gm23200-201ENSMUST00000104379 132 ntBASIC10.68□□□□□ -0.7
Cd40lgP27548 Gm14058-201ENSMUST00000116082 735 ntBASIC10.68□□□□□ -0.7
Cd40lgP27548 Gm14724-201ENSMUST00000118400 537 ntBASIC10.68□□□□□ -0.7
Cd40lgP27548 Gm11450-201ENSMUST00000121144 333 ntBASIC10.68□□□□□ -0.7
Cd40lgP27548 Gm12566-201ENSMUST00000121479 359 ntBASIC10.68□□□□□ -0.7
Cd40lgP27548 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.68□□□□□ -0.7
Cd40lgP27548 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.68□□□□□ -0.7
Cd40lgP27548 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.68□□□□□ -0.7
Cd40lgP27548 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Cd40lgP27548 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.68□□□□□ -0.7
Cd40lgP27548 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.68□□□□□ -0.7
Cd40lgP27548 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC10.68□□□□□ -0.7
Cd40lgP27548 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.68□□□□□ -0.7
Cd40lgP27548 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.68□□□□□ -0.7
Cd40lgP27548 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC10.68□□□□□ -0.7
Cd40lgP27548 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.68□□□□□ -0.7
Cd40lgP27548 Nsd1-205ENSMUST00000224693 852 ntBASIC10.68□□□□□ -0.7
Cd40lgP27548 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.68□□□□□ -0.7
Cd40lgP27548 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.68□□□□□ -0.7
Cd40lgP27548 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.68□□□□□ -0.7
Cd40lgP27548 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.68□□□□□ -0.7
Cd40lgP27548 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.68□□□□□ -0.7
Cd40lgP27548 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Cd40lgP27548 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cd40lgP27548 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.68□□□□□ -0.7
Cd40lgP27548 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cd40lgP27548 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cd40lgP27548 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cd40lgP27548 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cd40lgP27548 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.67□□□□□ -0.7
Cd40lgP27548 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Cd40lgP27548 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms